RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
FAM3A-207ENST00000416319 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
FAM3A-207ENST00000416319 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
FAM3A-207ENST00000416319 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
FAM3A-207ENST00000416319 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
FAM3A-207ENST00000416319 MT1GP13640 62 aa7.08□□□□□ -1.28
FAM3A-207ENST00000416319 MT1LQ93083 61 aa7.08□□□□□ -1.28
FAM3A-207ENST00000416319 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
FAM3A-207ENST00000416319 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
FAM3A-207ENST00000416319 MT1MQ8N339 61 aa6.95□□□□□ -1.3
FAM3A-207ENST00000416319 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
FAM3A-207ENST00000416319 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
FAM3A-207ENST00000416319 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
FAM3A-207ENST00000416319 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
FAM3A-207ENST00000416319 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
FAM3A-207ENST00000416319 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
FAM3A-207ENST00000416319 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
FAM3A-207ENST00000416319 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
FAM3A-207ENST00000416319 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
FAM3A-207ENST00000416319 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
FAM3A-207ENST00000416319 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
FAM3A-207ENST00000416319 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
FAM3A-207ENST00000416319 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
FAM3A-207ENST00000416319 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
FAM3A-207ENST00000416319 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
FAM3A-207ENST00000416319 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
FAM3A-207ENST00000416319 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
FAM3A-207ENST00000416319 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
FAM3A-207ENST00000416319 MT4P47944 62 aa6.23□□□□□ -1.41
FAM3A-207ENST00000416319 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
FAM3A-207ENST00000416319 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
FAM3A-207ENST00000416319 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
FAM3A-207ENST00000416319 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
FAM3A-207ENST00000416319 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
FAM3A-207ENST00000416319 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
FAM3A-207ENST00000416319 MT1AP04731 61 aa6.04□□□□□ -1.44
FAM3A-207ENST00000416319 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
FAM3A-207ENST00000416319 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
FAM3A-207ENST00000416319 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
FAM3A-207ENST00000416319 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
FAM3A-207ENST00000416319 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
FAM3A-207ENST00000416319 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
FAM3A-207ENST00000416319 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
FAM3A-207ENST00000416319 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
FAM3A-207ENST00000416319 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
FAM3A-207ENST00000416319 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
FAM3A-207ENST00000416319 MT3P25713 68 aa5.52□□□□□ -1.53
FAM3A-207ENST00000416319 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
FAM3A-207ENST00000416319 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
FAM3A-207ENST00000416319 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
FAM3A-207ENST00000416319 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
FAM3A-207ENST00000416319 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
FAM3A-207ENST00000416319 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
FAM3A-207ENST00000416319 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
FAM3A-207ENST00000416319 LCE1EQ5T753 118 aa5□□□□□ -1.61
FAM3A-207ENST00000416319 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
FAM3A-207ENST00000416319 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
FAM3A-207ENST00000416319 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
FAM3A-207ENST00000416319 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
FAM3A-207ENST00000416319 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
FAM3A-207ENST00000416319 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
FAM3A-207ENST00000416319 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
FAM3A-207ENST00000416319 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
FAM3A-207ENST00000416319 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
FAM3A-207ENST00000416319 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
FAM3A-207ENST00000416319 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
FAM3A-207ENST00000416319 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
FAM3A-207ENST00000416319 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
FAM3A-207ENST00000416319 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
FAM3A-207ENST00000416319 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
FAM3A-207ENST00000416319 INE1O15225 51 aa3.87□□□□□ -1.79
FAM3A-207ENST00000416319 PRM1P04553 51 aa3.69□□□□□ -1.82
FAM3A-207ENST00000416319 H3BS24 57 aa3.65□□□□□ -1.83
FAM3A-207ENST00000416319 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
FAM3A-207ENST00000416319 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
FAM3A-207ENST00000416319 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
FAM3A-207ENST00000416319 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
FAM3A-207ENST00000416319 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 33.8 ms