RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
LINC01090-201ENST00000415357 A6NED7 52 aa3.89□□□□□ -1.79
LINC01090-201ENST00000415357 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
LINC01090-201ENST00000415357 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
LINC01090-201ENST00000415357 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
LINC01090-201ENST00000415357 COA5Q86WW8 74 aa3.87□□□□□ -1.79
LINC01090-201ENST00000415357 SPRR2EP22531 72 aa3.84□□□□□ -1.79
LINC01090-201ENST00000415357 SPRR2BP35325 72 aa3.84□□□□□ -1.79
LINC01090-201ENST00000415357 SPRR2AP35326 72 aa3.84□□□□□ -1.79
LINC01090-201ENST00000415357 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
LINC01090-201ENST00000415357 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
LINC01090-201ENST00000415357 A8MU10 97 aa3.79□□□□□ -1.8
LINC01090-201ENST00000415357 A0A0D9SG42 100 aa3.75□□□□□ -1.81
LINC01090-201ENST00000415357 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
LINC01090-201ENST00000415357 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
LINC01090-201ENST00000415357 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
LINC01090-201ENST00000415357 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
LINC01090-201ENST00000415357 SPRR2DP22532 72 aa3.71□□□□□ -1.82
LINC01090-201ENST00000415357 A0A1B0GU33 70 aa3.7□□□□□ -1.82
LINC01090-201ENST00000415357 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
LINC01090-201ENST00000415357 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
LINC01090-201ENST00000415357 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
LINC01090-201ENST00000415357 A0A1B0GU69 56 aa3.65□□□□□ -1.83
LINC01090-201ENST00000415357 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
LINC01090-201ENST00000415357 UQCR11O14957 56 aa3.61□□□□□ -1.83
LINC01090-201ENST00000415357 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
LINC01090-201ENST00000415357 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
LINC01090-201ENST00000415357 MT1EP04732 61 aa3.58□□□□□ -1.84
LINC01090-201ENST00000415357 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
LINC01090-201ENST00000415357 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
LINC01090-201ENST00000415357 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
LINC01090-201ENST00000415357 ROMO1P60602 79 aa3.5□□□□□ -1.85
LINC01090-201ENST00000415357 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
LINC01090-201ENST00000415357 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
LINC01090-201ENST00000415357 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
LINC01090-201ENST00000415357 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
LINC01090-201ENST00000415357 TNP1P09430 55 aa3.45□□□□□ -1.86
LINC01090-201ENST00000415357 K7ERS5 55 aa3.43□□□□□ -1.86
LINC01090-201ENST00000415357 MT1GP13640 62 aa3.43□□□□□ -1.86
LINC01090-201ENST00000415357 MT1LQ93083 61 aa3.42□□□□□ -1.86
LINC01090-201ENST00000415357 MT1MQ8N339 61 aa3.41□□□□□ -1.86
LINC01090-201ENST00000415357 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
LINC01090-201ENST00000415357 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
LINC01090-201ENST00000415357 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
LINC01090-201ENST00000415357 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
LINC01090-201ENST00000415357 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
LINC01090-201ENST00000415357 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
LINC01090-201ENST00000415357 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
LINC01090-201ENST00000415357 MT4P47944 62 aa3.26□□□□□ -1.89
LINC01090-201ENST00000415357 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
LINC01090-201ENST00000415357 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
LINC01090-201ENST00000415357 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
LINC01090-201ENST00000415357 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
LINC01090-201ENST00000415357 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
LINC01090-201ENST00000415357 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.93
LINC01090-201ENST00000415357 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
LINC01090-201ENST00000415357 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
LINC01090-201ENST00000415357 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
LINC01090-201ENST00000415357 KRTAP12-4P60329 112 aa3□□□□□ -1.93
LINC01090-201ENST00000415357 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
LINC01090-201ENST00000415357 MT1AP04731 61 aa2.9□□□□□ -1.95
LINC01090-201ENST00000415357 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
LINC01090-201ENST00000415357 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
LINC01090-201ENST00000415357 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
LINC01090-201ENST00000415357 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
LINC01090-201ENST00000415357 INE1O15225 51 aa2.76□□□□□ -1.97
LINC01090-201ENST00000415357 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
LINC01090-201ENST00000415357 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
LINC01090-201ENST00000415357 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
LINC01090-201ENST00000415357 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
LINC01090-201ENST00000415357 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
LINC01090-201ENST00000415357 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
LINC01090-201ENST00000415357 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
LINC01090-201ENST00000415357 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
LINC01090-201ENST00000415357 PRM1P04553 51 aa1.74□□□□□ -2.13
LINC01090-201ENST00000415357 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
LINC01090-201ENST00000415357 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms