RNA–Protein interactions for RNA: ENST00000415023.1

ITSN1-213, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 519 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-213ENST00000415023 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
ITSN1-213ENST00000415023 A0A0D9SG42 100 aa4.05□□□□□ -1.76
ITSN1-213ENST00000415023 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
ITSN1-213ENST00000415023 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
ITSN1-213ENST00000415023 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
ITSN1-213ENST00000415023 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
ITSN1-213ENST00000415023 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
ITSN1-213ENST00000415023 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
ITSN1-213ENST00000415023 LCE4AQ5TA78 99 aa4□□□□□ -1.77
ITSN1-213ENST00000415023 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
ITSN1-213ENST00000415023 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
ITSN1-213ENST00000415023 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
ITSN1-213ENST00000415023 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
ITSN1-213ENST00000415023 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
ITSN1-213ENST00000415023 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
ITSN1-213ENST00000415023 ROMO1P60602 79 aa3.89□□□□□ -1.79
ITSN1-213ENST00000415023 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
ITSN1-213ENST00000415023 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
ITSN1-213ENST00000415023 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
ITSN1-213ENST00000415023 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
ITSN1-213ENST00000415023 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
ITSN1-213ENST00000415023 MT1EP04732 61 aa3.75□□□□□ -1.81
ITSN1-213ENST00000415023 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
ITSN1-213ENST00000415023 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
ITSN1-213ENST00000415023 MT4P47944 62 aa3.73□□□□□ -1.81
ITSN1-213ENST00000415023 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
ITSN1-213ENST00000415023 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
ITSN1-213ENST00000415023 TNP1P09430 55 aa3.7□□□□□ -1.82
ITSN1-213ENST00000415023 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
ITSN1-213ENST00000415023 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
ITSN1-213ENST00000415023 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
ITSN1-213ENST00000415023 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
ITSN1-213ENST00000415023 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
ITSN1-213ENST00000415023 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
ITSN1-213ENST00000415023 MT1GP13640 62 aa3.6□□□□□ -1.83
ITSN1-213ENST00000415023 MT1LQ93083 61 aa3.58□□□□□ -1.84
ITSN1-213ENST00000415023 MT1MQ8N339 61 aa3.56□□□□□ -1.84
ITSN1-213ENST00000415023 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
ITSN1-213ENST00000415023 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
ITSN1-213ENST00000415023 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
ITSN1-213ENST00000415023 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
ITSN1-213ENST00000415023 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
ITSN1-213ENST00000415023 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
ITSN1-213ENST00000415023 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
ITSN1-213ENST00000415023 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
ITSN1-213ENST00000415023 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
ITSN1-213ENST00000415023 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
ITSN1-213ENST00000415023 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
ITSN1-213ENST00000415023 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
ITSN1-213ENST00000415023 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
ITSN1-213ENST00000415023 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
ITSN1-213ENST00000415023 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
ITSN1-213ENST00000415023 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
ITSN1-213ENST00000415023 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
ITSN1-213ENST00000415023 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
ITSN1-213ENST00000415023 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
ITSN1-213ENST00000415023 MT1AP04731 61 aa3.03□□□□□ -1.92
ITSN1-213ENST00000415023 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
ITSN1-213ENST00000415023 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
ITSN1-213ENST00000415023 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
ITSN1-213ENST00000415023 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
ITSN1-213ENST00000415023 MT3P25713 68 aa2.73□□□□□ -1.97
ITSN1-213ENST00000415023 INE1O15225 51 aa2.58□□□□□ -2
ITSN1-213ENST00000415023 LCE1EQ5T753 118 aa2.57□□□□□ -2
ITSN1-213ENST00000415023 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
ITSN1-213ENST00000415023 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
ITSN1-213ENST00000415023 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
ITSN1-213ENST00000415023 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
ITSN1-213ENST00000415023 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
ITSN1-213ENST00000415023 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
ITSN1-213ENST00000415023 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
ITSN1-213ENST00000415023 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
ITSN1-213ENST00000415023 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
ITSN1-213ENST00000415023 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ITSN1-213ENST00000415023 PRM1P04553 51 aa1.99□□□□□ -2.09
ITSN1-213ENST00000415023 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
ITSN1-213ENST00000415023 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
ITSN1-213ENST00000415023 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 46.1 ms