RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 MT1EP04732 61 aa3.55□□□□□ -1.84
RIF1-202ENST00000414861 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
RIF1-202ENST00000414861 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
RIF1-202ENST00000414861 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
RIF1-202ENST00000414861 MT1LQ93083 61 aa3.46□□□□□ -1.85
RIF1-202ENST00000414861 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
RIF1-202ENST00000414861 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
RIF1-202ENST00000414861 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
RIF1-202ENST00000414861 SPRR2EP22531 72 aa3.42□□□□□ -1.86
RIF1-202ENST00000414861 SPRR2BP35325 72 aa3.42□□□□□ -1.86
RIF1-202ENST00000414861 SPRR2AP35326 72 aa3.42□□□□□ -1.86
RIF1-202ENST00000414861 NEBP20929 6669 aa3.4□□□□□ -1.86
RIF1-202ENST00000414861 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
RIF1-202ENST00000414861 MT1GP13640 62 aa3.37□□□□□ -1.87
RIF1-202ENST00000414861 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RIF1-202ENST00000414861 MT1MQ8N339 61 aa3.36□□□□□ -1.87
RIF1-202ENST00000414861 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
RIF1-202ENST00000414861 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
RIF1-202ENST00000414861 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
RIF1-202ENST00000414861 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
RIF1-202ENST00000414861 SPRR2DP22532 72 aa3.3□□□□□ -1.88
RIF1-202ENST00000414861 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
RIF1-202ENST00000414861 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
RIF1-202ENST00000414861 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
RIF1-202ENST00000414861 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
RIF1-202ENST00000414861 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
RIF1-202ENST00000414861 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
RIF1-202ENST00000414861 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
RIF1-202ENST00000414861 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
RIF1-202ENST00000414861 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
RIF1-202ENST00000414861 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
RIF1-202ENST00000414861 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
RIF1-202ENST00000414861 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
RIF1-202ENST00000414861 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
RIF1-202ENST00000414861 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
RIF1-202ENST00000414861 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
RIF1-202ENST00000414861 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
RIF1-202ENST00000414861 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
RIF1-202ENST00000414861 MT1AP04731 61 aa2.93□□□□□ -1.94
RIF1-202ENST00000414861 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
RIF1-202ENST00000414861 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
RIF1-202ENST00000414861 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
RIF1-202ENST00000414861 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
RIF1-202ENST00000414861 MT4P47944 62 aa2.88□□□□□ -1.95
RIF1-202ENST00000414861 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
RIF1-202ENST00000414861 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
RIF1-202ENST00000414861 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
RIF1-202ENST00000414861 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
RIF1-202ENST00000414861 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
RIF1-202ENST00000414861 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
RIF1-202ENST00000414861 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
RIF1-202ENST00000414861 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
RIF1-202ENST00000414861 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
RIF1-202ENST00000414861 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
RIF1-202ENST00000414861 MT3P25713 68 aa2.65□□□□□ -1.99
RIF1-202ENST00000414861 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
RIF1-202ENST00000414861 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
RIF1-202ENST00000414861 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
RIF1-202ENST00000414861 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.01
RIF1-202ENST00000414861 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
RIF1-202ENST00000414861 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
RIF1-202ENST00000414861 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
RIF1-202ENST00000414861 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
RIF1-202ENST00000414861 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
RIF1-202ENST00000414861 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
RIF1-202ENST00000414861 INE1O15225 51 aa2.28□□□□□ -2.04
RIF1-202ENST00000414861 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
RIF1-202ENST00000414861 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
RIF1-202ENST00000414861 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
RIF1-202ENST00000414861 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
RIF1-202ENST00000414861 PRM1P04553 51 aa2.03□□□□□ -2.08
RIF1-202ENST00000414861 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
RIF1-202ENST00000414861 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
RIF1-202ENST00000414861 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
RIF1-202ENST00000414861 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
RIF1-202ENST00000414861 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
RIF1-202ENST00000414861 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
RIF1-202ENST00000414861 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 53.5 ms