RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 LCE5AQ5TCM9 118 aa9.24□□□□□ -0.93
CPNE1-207ENST00000414664 A6NED7 52 aa9.18□□□□□ -0.94
CPNE1-207ENST00000414664 MT1GP13640 62 aa9.11□□□□□ -0.95
CPNE1-207ENST00000414664 KRTAP25-1Q3LHN0 102 aa9.09□□□□□ -0.95
CPNE1-207ENST00000414664 PP632Q6XCG6 107 aa9.07□□□□□ -0.96
CPNE1-207ENST00000414664 MT1LQ93083 61 aa9.02□□□□□ -0.97
CPNE1-207ENST00000414664 KRTAP12-3P60328 96 aa8.94□□□□□ -0.98
CPNE1-207ENST00000414664 DSTQ03001 7570 aaKnown RBP8.92□□□□□ -0.98
CPNE1-207ENST00000414664 MT1MQ8N339 61 aa8.91□□□□□ -0.98
CPNE1-207ENST00000414664 CDC42SE1Q9NRR8 79 aa8.83□□□□□ -1
CPNE1-207ENST00000414664 KRTAP23-1A1A580 65 aa8.78□□□□□ -1
CPNE1-207ENST00000414664 ROMO1P60602 79 aa8.69□□□□□ -1.02
CPNE1-207ENST00000414664 KRTAP4-3Q9BYR4 195 aa8.65□□□□□ -1.02
CPNE1-207ENST00000414664 KRTAP4-7Q9BYR0 210 aa8.56□□□□□ -1.04
CPNE1-207ENST00000414664 KRTAP19-4Q3LI73 84 aa8.54□□□□□ -1.04
CPNE1-207ENST00000414664 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
CPNE1-207ENST00000414664 LCE4AQ5TA78 99 aa8.47□□□□□ -1.05
CPNE1-207ENST00000414664 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.06
CPNE1-207ENST00000414664 GPR98Q8WXG9 6306 aa8.43□□□□□ -1.06
CPNE1-207ENST00000414664 LCE1DQ5T752 114 aa8.34□□□□□ -1.07
CPNE1-207ENST00000414664 KRTAP5-4Q6L8H1 288 aa8.33□□□□□ -1.08
CPNE1-207ENST00000414664 MT4P47944 62 aa8.29□□□□□ -1.08
CPNE1-207ENST00000414664 LCE3CQ5T5A8 94 aa8.26□□□□□ -1.09
CPNE1-207ENST00000414664 BRK1Q8WUW1 75 aa8.18□□□□□ -1.1
CPNE1-207ENST00000414664 HMCN1Q96RW7 5635 aa8.17□□□□□ -1.1
CPNE1-207ENST00000414664 KRTAP5-5Q701N2 237 aaPredicted RBP8.13□□□□□ -1.11
CPNE1-207ENST00000414664 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
CPNE1-207ENST00000414664 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
CPNE1-207ENST00000414664 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
CPNE1-207ENST00000414664 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
CPNE1-207ENST00000414664 KRTAP20-2Q3LI61 65 aa7.84□□□□□ -1.15
CPNE1-207ENST00000414664 AHNAK2Q8IVF2 5795 aa7.77□□□□□ -1.17
CPNE1-207ENST00000414664 PMAIP1Q13794 54 aa7.74□□□□□ -1.17
CPNE1-207ENST00000414664 SYNE1Q8NF91 8797 aaKnown RBP7.72□□□□□ -1.17
CPNE1-207ENST00000414664 KRTAP9-6A8MVA2 160 aa7.71□□□□□ -1.18
CPNE1-207ENST00000414664 MT1AP04731 61 aa7.69□□□□□ -1.18
CPNE1-207ENST00000414664 KRTAP6-1Q3LI64 71 aa7.6□□□□□ -1.19
CPNE1-207ENST00000414664 KRTAP5-10Q6L8G5 202 aa7.59□□□□□ -1.19
CPNE1-207ENST00000414664 KRTAP5-3Q6L8H2 238 aa7.59□□□□□ -1.19
CPNE1-207ENST00000414664 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
CPNE1-207ENST00000414664 KRTAP9-4Q9BYQ2 154 aa7.42□□□□□ -1.22
CPNE1-207ENST00000414664 KRTAP5-2Q701N4 177 aa7.34□□□□□ -1.23
CPNE1-207ENST00000414664 KRTAP5-7Q6L8G8 165 aa7.33□□□□□ -1.24
CPNE1-207ENST00000414664 PRAC1Q96KF2 57 aa7.3□□□□□ -1.24
CPNE1-207ENST00000414664 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
CPNE1-207ENST00000414664 SVIPQ8NHG7 77 aa7.16□□□□□ -1.26
CPNE1-207ENST00000414664 KRTAP4-11Q9BYQ6 195 aa7.1□□□□□ -1.27
CPNE1-207ENST00000414664 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
CPNE1-207ENST00000414664 MT3P25713 68 aa7.06□□□□□ -1.28
CPNE1-207ENST00000414664 KRTAP5-8O75690 187 aa6.83□□□□□ -1.32
CPNE1-207ENST00000414664 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
CPNE1-207ENST00000414664 KRTAP5-1Q6L8H4 278 aa6.52□□□□□ -1.37
CPNE1-207ENST00000414664 AHNAKQ09666 5890 aaKnown RBP6.51□□□□□ -1.37
CPNE1-207ENST00000414664 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
CPNE1-207ENST00000414664 MUC5BQ9HC84 5762 aaPredicted RBP6.45□□□□□ -1.38
CPNE1-207ENST00000414664 MUC5ACP98088 5654 aa6.43□□□□□ -1.38
CPNE1-207ENST00000414664 LCE1EQ5T753 118 aa6.41□□□□□ -1.38
CPNE1-207ENST00000414664 LUZP6Q538Z0 58 aa6.25□□□□□ -1.41
CPNE1-207ENST00000414664 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
CPNE1-207ENST00000414664 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
CPNE1-207ENST00000414664 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
CPNE1-207ENST00000414664 LCE1CQ5T751 118 aa5.93□□□□□ -1.46
CPNE1-207ENST00000414664 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
CPNE1-207ENST00000414664 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.43□□□□□ -1.54
CPNE1-207ENST00000414664 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
CPNE1-207ENST00000414664 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
CPNE1-207ENST00000414664 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
CPNE1-207ENST00000414664 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
CPNE1-207ENST00000414664 KRTAP21-2Q3LI59 83 aa5□□□□□ -1.61
CPNE1-207ENST00000414664 H3BS24 57 aa4.9□□□□□ -1.63
CPNE1-207ENST00000414664 PHGR1C9JFL3 82 aa4.59□□□□□ -1.67
CPNE1-207ENST00000414664 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
CPNE1-207ENST00000414664 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
CPNE1-207ENST00000414664 PRM1P04553 51 aa4.43□□□□□ -1.7
CPNE1-207ENST00000414664 INE1O15225 51 aa4.39□□□□□ -1.71
CPNE1-207ENST00000414664 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.75
CPNE1-207ENST00000414664 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CPNE1-207ENST00000414664 MUC16Q8WXI7 14507 aa2.95□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 15.5 ms