RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
LINC00330-201ENST00000414562 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
LINC00330-201ENST00000414562 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
LINC00330-201ENST00000414562 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
LINC00330-201ENST00000414562 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
LINC00330-201ENST00000414562 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
LINC00330-201ENST00000414562 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
LINC00330-201ENST00000414562 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
LINC00330-201ENST00000414562 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
LINC00330-201ENST00000414562 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
LINC00330-201ENST00000414562 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
LINC00330-201ENST00000414562 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
LINC00330-201ENST00000414562 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
LINC00330-201ENST00000414562 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
LINC00330-201ENST00000414562 MT1EP04732 61 aa4.09□□□□□ -1.76
LINC00330-201ENST00000414562 NEBP20929 6669 aa4.08□□□□□ -1.76
LINC00330-201ENST00000414562 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
LINC00330-201ENST00000414562 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
LINC00330-201ENST00000414562 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
LINC00330-201ENST00000414562 MT1LQ93083 61 aa3.99□□□□□ -1.77
LINC00330-201ENST00000414562 SPRR2EP22531 72 aa3.97□□□□□ -1.77
LINC00330-201ENST00000414562 SPRR2BP35325 72 aa3.97□□□□□ -1.77
LINC00330-201ENST00000414562 SPRR2AP35326 72 aa3.97□□□□□ -1.77
LINC00330-201ENST00000414562 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
LINC00330-201ENST00000414562 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
LINC00330-201ENST00000414562 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
LINC00330-201ENST00000414562 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
LINC00330-201ENST00000414562 MT1MQ8N339 61 aa3.87□□□□□ -1.79
LINC00330-201ENST00000414562 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
LINC00330-201ENST00000414562 MT1GP13640 62 aa3.86□□□□□ -1.79
LINC00330-201ENST00000414562 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
LINC00330-201ENST00000414562 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
LINC00330-201ENST00000414562 SPRR2DP22532 72 aa3.82□□□□□ -1.8
LINC00330-201ENST00000414562 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
LINC00330-201ENST00000414562 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
LINC00330-201ENST00000414562 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
LINC00330-201ENST00000414562 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
LINC00330-201ENST00000414562 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
LINC00330-201ENST00000414562 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
LINC00330-201ENST00000414562 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
LINC00330-201ENST00000414562 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
LINC00330-201ENST00000414562 MT3P25713 68 aa3.46□□□□□ -1.86
LINC00330-201ENST00000414562 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
LINC00330-201ENST00000414562 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
LINC00330-201ENST00000414562 MT1AP04731 61 aa3.38□□□□□ -1.87
LINC00330-201ENST00000414562 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
LINC00330-201ENST00000414562 MT4P47944 62 aa3.37□□□□□ -1.87
LINC00330-201ENST00000414562 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
LINC00330-201ENST00000414562 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
LINC00330-201ENST00000414562 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
LINC00330-201ENST00000414562 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
LINC00330-201ENST00000414562 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
LINC00330-201ENST00000414562 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
LINC00330-201ENST00000414562 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
LINC00330-201ENST00000414562 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
LINC00330-201ENST00000414562 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
LINC00330-201ENST00000414562 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
LINC00330-201ENST00000414562 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
LINC00330-201ENST00000414562 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
LINC00330-201ENST00000414562 PRM1P04553 51 aa2.93□□□□□ -1.94
LINC00330-201ENST00000414562 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
LINC00330-201ENST00000414562 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
LINC00330-201ENST00000414562 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
LINC00330-201ENST00000414562 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
LINC00330-201ENST00000414562 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
LINC00330-201ENST00000414562 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
LINC00330-201ENST00000414562 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
LINC00330-201ENST00000414562 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
LINC00330-201ENST00000414562 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
LINC00330-201ENST00000414562 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
LINC00330-201ENST00000414562 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
LINC00330-201ENST00000414562 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
LINC00330-201ENST00000414562 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
LINC00330-201ENST00000414562 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
LINC00330-201ENST00000414562 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
LINC00330-201ENST00000414562 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
LINC00330-201ENST00000414562 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 42.4 ms