RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
LINC00887-202ENST00000414120 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
LINC00887-202ENST00000414120 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
LINC00887-202ENST00000414120 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
LINC00887-202ENST00000414120 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
LINC00887-202ENST00000414120 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
LINC00887-202ENST00000414120 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
LINC00887-202ENST00000414120 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
LINC00887-202ENST00000414120 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
LINC00887-202ENST00000414120 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
LINC00887-202ENST00000414120 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
LINC00887-202ENST00000414120 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
LINC00887-202ENST00000414120 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
LINC00887-202ENST00000414120 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
LINC00887-202ENST00000414120 KRTAP5-9P26371 169 aa4.34□□□□□ -1.72
LINC00887-202ENST00000414120 SPRR2EP22531 72 aa4.3□□□□□ -1.72
LINC00887-202ENST00000414120 SPRR2BP35325 72 aa4.3□□□□□ -1.72
LINC00887-202ENST00000414120 SPRR2AP35326 72 aa4.3□□□□□ -1.72
LINC00887-202ENST00000414120 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
LINC00887-202ENST00000414120 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
LINC00887-202ENST00000414120 PRM1P04553 51 aa4.27□□□□□ -1.73
LINC00887-202ENST00000414120 NEBP20929 6669 aa4.24□□□□□ -1.73
LINC00887-202ENST00000414120 MT1EP04732 61 aa4.24□□□□□ -1.73
LINC00887-202ENST00000414120 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
LINC00887-202ENST00000414120 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
LINC00887-202ENST00000414120 MT1AP04731 61 aa4.16□□□□□ -1.74
LINC00887-202ENST00000414120 SPRR2DP22532 72 aa4.14□□□□□ -1.75
LINC00887-202ENST00000414120 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
LINC00887-202ENST00000414120 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
LINC00887-202ENST00000414120 MT1LQ93083 61 aa4.12□□□□□ -1.75
LINC00887-202ENST00000414120 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
LINC00887-202ENST00000414120 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
LINC00887-202ENST00000414120 MT1GP13640 62 aa4.05□□□□□ -1.76
LINC00887-202ENST00000414120 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
LINC00887-202ENST00000414120 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
LINC00887-202ENST00000414120 MT1MQ8N339 61 aa4.02□□□□□ -1.77
LINC00887-202ENST00000414120 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
LINC00887-202ENST00000414120 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
LINC00887-202ENST00000414120 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
LINC00887-202ENST00000414120 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
LINC00887-202ENST00000414120 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
LINC00887-202ENST00000414120 MT3P25713 68 aa3.9□□□□□ -1.79
LINC00887-202ENST00000414120 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
LINC00887-202ENST00000414120 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
LINC00887-202ENST00000414120 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
LINC00887-202ENST00000414120 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
LINC00887-202ENST00000414120 MT4P47944 62 aa3.67□□□□□ -1.82
LINC00887-202ENST00000414120 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
LINC00887-202ENST00000414120 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
LINC00887-202ENST00000414120 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
LINC00887-202ENST00000414120 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
LINC00887-202ENST00000414120 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
LINC00887-202ENST00000414120 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
LINC00887-202ENST00000414120 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
LINC00887-202ENST00000414120 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
LINC00887-202ENST00000414120 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
LINC00887-202ENST00000414120 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
LINC00887-202ENST00000414120 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
LINC00887-202ENST00000414120 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
LINC00887-202ENST00000414120 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
LINC00887-202ENST00000414120 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
LINC00887-202ENST00000414120 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
LINC00887-202ENST00000414120 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
LINC00887-202ENST00000414120 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
LINC00887-202ENST00000414120 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
LINC00887-202ENST00000414120 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
LINC00887-202ENST00000414120 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
LINC00887-202ENST00000414120 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
LINC00887-202ENST00000414120 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
LINC00887-202ENST00000414120 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
LINC00887-202ENST00000414120 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
LINC00887-202ENST00000414120 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
LINC00887-202ENST00000414120 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
LINC00887-202ENST00000414120 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
LINC00887-202ENST00000414120 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
LINC00887-202ENST00000414120 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
LINC00887-202ENST00000414120 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms