RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
TMEM248-202ENST00000413593 SPRR2DP22532 72 aa3.81□□□□□ -1.8
TMEM248-202ENST00000413593 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
TMEM248-202ENST00000413593 UQCR11O14957 56 aa3.77□□□□□ -1.81
TMEM248-202ENST00000413593 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
TMEM248-202ENST00000413593 MT1EP04732 61 aa3.75□□□□□ -1.81
TMEM248-202ENST00000413593 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
TMEM248-202ENST00000413593 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
TMEM248-202ENST00000413593 TNP1P09430 55 aa3.71□□□□□ -1.82
TMEM248-202ENST00000413593 MT3P25713 68 aa3.71□□□□□ -1.82
TMEM248-202ENST00000413593 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
TMEM248-202ENST00000413593 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
TMEM248-202ENST00000413593 V9GYY9 64 aa3.7□□□□□ -1.82
TMEM248-202ENST00000413593 Q1T7F1 81 aa3.69□□□□□ -1.82
TMEM248-202ENST00000413593 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
TMEM248-202ENST00000413593 PSPHP1O15172 72 aa3.68□□□□□ -1.82
TMEM248-202ENST00000413593 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
TMEM248-202ENST00000413593 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
TMEM248-202ENST00000413593 MT1GP13640 62 aa3.62□□□□□ -1.83
TMEM248-202ENST00000413593 K7ERS5 55 aa3.6□□□□□ -1.83
TMEM248-202ENST00000413593 MT1LQ93083 61 aa3.6□□□□□ -1.83
TMEM248-202ENST00000413593 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
TMEM248-202ENST00000413593 RPS28P62857 69 aaKnown RBP3.57□□□□□ -1.84
TMEM248-202ENST00000413593 A6NED7 52 aa3.56□□□□□ -1.84
TMEM248-202ENST00000413593 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
TMEM248-202ENST00000413593 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TMEM248-202ENST00000413593 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
TMEM248-202ENST00000413593 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
TMEM248-202ENST00000413593 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
TMEM248-202ENST00000413593 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TMEM248-202ENST00000413593 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
TMEM248-202ENST00000413593 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
TMEM248-202ENST00000413593 ROMO1P60602 79 aa3.38□□□□□ -1.87
TMEM248-202ENST00000413593 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TMEM248-202ENST00000413593 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
TMEM248-202ENST00000413593 MT4P47944 62 aa3.32□□□□□ -1.88
TMEM248-202ENST00000413593 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
TMEM248-202ENST00000413593 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
TMEM248-202ENST00000413593 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TMEM248-202ENST00000413593 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
TMEM248-202ENST00000413593 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
TMEM248-202ENST00000413593 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
TMEM248-202ENST00000413593 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
TMEM248-202ENST00000413593 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
TMEM248-202ENST00000413593 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
TMEM248-202ENST00000413593 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
TMEM248-202ENST00000413593 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
TMEM248-202ENST00000413593 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
TMEM248-202ENST00000413593 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
TMEM248-202ENST00000413593 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
TMEM248-202ENST00000413593 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
TMEM248-202ENST00000413593 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TMEM248-202ENST00000413593 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
TMEM248-202ENST00000413593 MT1AP04731 61 aa3.06□□□□□ -1.92
TMEM248-202ENST00000413593 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
TMEM248-202ENST00000413593 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
TMEM248-202ENST00000413593 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
TMEM248-202ENST00000413593 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
TMEM248-202ENST00000413593 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TMEM248-202ENST00000413593 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
TMEM248-202ENST00000413593 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
TMEM248-202ENST00000413593 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
TMEM248-202ENST00000413593 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
TMEM248-202ENST00000413593 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
TMEM248-202ENST00000413593 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
TMEM248-202ENST00000413593 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
TMEM248-202ENST00000413593 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
TMEM248-202ENST00000413593 MUC5ACP98088 5654 aa2.59□□□□□ -2
TMEM248-202ENST00000413593 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
TMEM248-202ENST00000413593 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
TMEM248-202ENST00000413593 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
TMEM248-202ENST00000413593 INE1O15225 51 aa2.18□□□□□ -2.06
TMEM248-202ENST00000413593 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
TMEM248-202ENST00000413593 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
TMEM248-202ENST00000413593 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
TMEM248-202ENST00000413593 PRM1P04553 51 aa1.73□□□□□ -2.13
TMEM248-202ENST00000413593 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
TMEM248-202ENST00000413593 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms