RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
PTPRN-203ENST00000412847 MT1MQ8N339 61 aa4.64□□□□□ -1.67
PTPRN-203ENST00000412847 UQCR11O14957 56 aa4.63□□□□□ -1.67
PTPRN-203ENST00000412847 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
PTPRN-203ENST00000412847 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
PTPRN-203ENST00000412847 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
PTPRN-203ENST00000412847 PSPHP1O15172 72 aa4.61□□□□□ -1.67
PTPRN-203ENST00000412847 A0A0D9SG42 100 aa4.6□□□□□ -1.67
PTPRN-203ENST00000412847 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
PTPRN-203ENST00000412847 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PTPRN-203ENST00000412847 MT1LQ93083 61 aa4.56□□□□□ -1.68
PTPRN-203ENST00000412847 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
PTPRN-203ENST00000412847 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
PTPRN-203ENST00000412847 A6NED7 52 aa4.52□□□□□ -1.69
PTPRN-203ENST00000412847 A8MU10 97 aa4.49□□□□□ -1.69
PTPRN-203ENST00000412847 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
PTPRN-203ENST00000412847 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
PTPRN-203ENST00000412847 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.69
PTPRN-203ENST00000412847 K7ERS5 55 aa4.45□□□□□ -1.7
PTPRN-203ENST00000412847 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
PTPRN-203ENST00000412847 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
PTPRN-203ENST00000412847 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
PTPRN-203ENST00000412847 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
PTPRN-203ENST00000412847 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
PTPRN-203ENST00000412847 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
PTPRN-203ENST00000412847 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
PTPRN-203ENST00000412847 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
PTPRN-203ENST00000412847 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
PTPRN-203ENST00000412847 TNP1P09430 55 aa4.24□□□□□ -1.73
PTPRN-203ENST00000412847 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
PTPRN-203ENST00000412847 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
PTPRN-203ENST00000412847 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
PTPRN-203ENST00000412847 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
PTPRN-203ENST00000412847 ROMO1P60602 79 aa4.16□□□□□ -1.74
PTPRN-203ENST00000412847 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
PTPRN-203ENST00000412847 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
PTPRN-203ENST00000412847 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
PTPRN-203ENST00000412847 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
PTPRN-203ENST00000412847 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
PTPRN-203ENST00000412847 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
PTPRN-203ENST00000412847 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
PTPRN-203ENST00000412847 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
PTPRN-203ENST00000412847 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
PTPRN-203ENST00000412847 MT1AP04731 61 aa3.88□□□□□ -1.79
PTPRN-203ENST00000412847 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
PTPRN-203ENST00000412847 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
PTPRN-203ENST00000412847 H3BS24 57 aa3.84□□□□□ -1.79
PTPRN-203ENST00000412847 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
PTPRN-203ENST00000412847 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
PTPRN-203ENST00000412847 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
PTPRN-203ENST00000412847 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
PTPRN-203ENST00000412847 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
PTPRN-203ENST00000412847 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
PTPRN-203ENST00000412847 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
PTPRN-203ENST00000412847 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
PTPRN-203ENST00000412847 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
PTPRN-203ENST00000412847 MT3P25713 68 aa3.55□□□□□ -1.84
PTPRN-203ENST00000412847 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
PTPRN-203ENST00000412847 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
PTPRN-203ENST00000412847 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
PTPRN-203ENST00000412847 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
PTPRN-203ENST00000412847 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
PTPRN-203ENST00000412847 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
PTPRN-203ENST00000412847 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
PTPRN-203ENST00000412847 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
PTPRN-203ENST00000412847 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
PTPRN-203ENST00000412847 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
PTPRN-203ENST00000412847 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
PTPRN-203ENST00000412847 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
PTPRN-203ENST00000412847 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
PTPRN-203ENST00000412847 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
PTPRN-203ENST00000412847 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
PTPRN-203ENST00000412847 INE1O15225 51 aa2.44□□□□□ -2.02
PTPRN-203ENST00000412847 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
PTPRN-203ENST00000412847 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
PTPRN-203ENST00000412847 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PTPRN-203ENST00000412847 PRM1P04553 51 aa2.12□□□□□ -2.07
PTPRN-203ENST00000412847 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 304.6 ms