RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
RBM39-207ENST00000412738 A8MU10 97 aa5.02□□□□□ -1.61
RBM39-207ENST00000412738 MT1GP13640 62 aa4.99□□□□□ -1.61
RBM39-207ENST00000412738 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
RBM39-207ENST00000412738 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
RBM39-207ENST00000412738 TNP1P09430 55 aa4.96□□□□□ -1.62
RBM39-207ENST00000412738 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
RBM39-207ENST00000412738 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
RBM39-207ENST00000412738 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
RBM39-207ENST00000412738 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
RBM39-207ENST00000412738 MT1MQ8N339 61 aa4.88□□□□□ -1.63
RBM39-207ENST00000412738 MT1LQ93083 61 aa4.88□□□□□ -1.63
RBM39-207ENST00000412738 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
RBM39-207ENST00000412738 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
RBM39-207ENST00000412738 UQCR11O14957 56 aa4.8□□□□□ -1.64
RBM39-207ENST00000412738 MT4P47944 62 aa4.77□□□□□ -1.65
RBM39-207ENST00000412738 TMEM258P61165 79 aa4.77□□□□□ -1.65
RBM39-207ENST00000412738 PCP4P48539 62 aa4.75□□□□□ -1.65
RBM39-207ENST00000412738 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
RBM39-207ENST00000412738 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
RBM39-207ENST00000412738 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
RBM39-207ENST00000412738 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
RBM39-207ENST00000412738 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
RBM39-207ENST00000412738 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
RBM39-207ENST00000412738 K7ERS5 55 aa4.66□□□□□ -1.66
RBM39-207ENST00000412738 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
RBM39-207ENST00000412738 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
RBM39-207ENST00000412738 KRTAP5-7Q6L8G8 165 aa4.61□□□□□ -1.67
RBM39-207ENST00000412738 V9GYY9 64 aa4.58□□□□□ -1.68
RBM39-207ENST00000412738 PSPHP1O15172 72 aa4.54□□□□□ -1.68
RBM39-207ENST00000412738 Q1T7F1 81 aa4.49□□□□□ -1.69
RBM39-207ENST00000412738 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
RBM39-207ENST00000412738 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
RBM39-207ENST00000412738 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
RBM39-207ENST00000412738 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
RBM39-207ENST00000412738 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
RBM39-207ENST00000412738 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
RBM39-207ENST00000412738 A6NED7 52 aa4.41□□□□□ -1.7
RBM39-207ENST00000412738 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
RBM39-207ENST00000412738 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
RBM39-207ENST00000412738 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
RBM39-207ENST00000412738 ROMO1P60602 79 aa4.27□□□□□ -1.73
RBM39-207ENST00000412738 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
RBM39-207ENST00000412738 MT1AP04731 61 aa4.16□□□□□ -1.74
RBM39-207ENST00000412738 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
RBM39-207ENST00000412738 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
RBM39-207ENST00000412738 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
RBM39-207ENST00000412738 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
RBM39-207ENST00000412738 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
RBM39-207ENST00000412738 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
RBM39-207ENST00000412738 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
RBM39-207ENST00000412738 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
RBM39-207ENST00000412738 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
RBM39-207ENST00000412738 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
RBM39-207ENST00000412738 MT3P25713 68 aa3.84□□□□□ -1.79
RBM39-207ENST00000412738 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
RBM39-207ENST00000412738 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
RBM39-207ENST00000412738 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
RBM39-207ENST00000412738 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
RBM39-207ENST00000412738 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
RBM39-207ENST00000412738 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
RBM39-207ENST00000412738 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
RBM39-207ENST00000412738 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
RBM39-207ENST00000412738 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
RBM39-207ENST00000412738 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
RBM39-207ENST00000412738 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
RBM39-207ENST00000412738 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RBM39-207ENST00000412738 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
RBM39-207ENST00000412738 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RBM39-207ENST00000412738 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
RBM39-207ENST00000412738 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
RBM39-207ENST00000412738 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
RBM39-207ENST00000412738 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
RBM39-207ENST00000412738 INE1O15225 51 aa2.41□□□□□ -2.02
RBM39-207ENST00000412738 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
RBM39-207ENST00000412738 PRM1P04553 51 aa2.18□□□□□ -2.06
RBM39-207ENST00000412738 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
RBM39-207ENST00000412738 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms