RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
SMPD4-203ENST00000412570 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
SMPD4-203ENST00000412570 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
SMPD4-203ENST00000412570 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SMPD4-203ENST00000412570 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
SMPD4-203ENST00000412570 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SMPD4-203ENST00000412570 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
SMPD4-203ENST00000412570 MT1EP04732 61 aa3.48□□□□□ -1.85
SMPD4-203ENST00000412570 SPRR2EP22531 72 aa3.42□□□□□ -1.86
SMPD4-203ENST00000412570 SPRR2BP35325 72 aa3.42□□□□□ -1.86
SMPD4-203ENST00000412570 SPRR2AP35326 72 aa3.42□□□□□ -1.86
SMPD4-203ENST00000412570 MT1LQ93083 61 aa3.41□□□□□ -1.86
SMPD4-203ENST00000412570 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
SMPD4-203ENST00000412570 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
SMPD4-203ENST00000412570 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
SMPD4-203ENST00000412570 MT1GP13640 62 aa3.35□□□□□ -1.87
SMPD4-203ENST00000412570 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.88
SMPD4-203ENST00000412570 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SMPD4-203ENST00000412570 MT1MQ8N339 61 aa3.3□□□□□ -1.88
SMPD4-203ENST00000412570 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
SMPD4-203ENST00000412570 SPRR2DP22532 72 aa3.26□□□□□ -1.89
SMPD4-203ENST00000412570 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
SMPD4-203ENST00000412570 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
SMPD4-203ENST00000412570 KRTAP5-9P26371 169 aa3.21□□□□□ -1.89
SMPD4-203ENST00000412570 NEBP20929 6669 aa3.18□□□□□ -1.9
SMPD4-203ENST00000412570 INE1O15225 51 aa3.14□□□□□ -1.91
SMPD4-203ENST00000412570 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
SMPD4-203ENST00000412570 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.92
SMPD4-203ENST00000412570 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
SMPD4-203ENST00000412570 MT4P47944 62 aa3.02□□□□□ -1.93
SMPD4-203ENST00000412570 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
SMPD4-203ENST00000412570 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
SMPD4-203ENST00000412570 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
SMPD4-203ENST00000412570 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
SMPD4-203ENST00000412570 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
SMPD4-203ENST00000412570 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
SMPD4-203ENST00000412570 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
SMPD4-203ENST00000412570 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
SMPD4-203ENST00000412570 MT1AP04731 61 aa2.82□□□□□ -1.96
SMPD4-203ENST00000412570 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
SMPD4-203ENST00000412570 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SMPD4-203ENST00000412570 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
SMPD4-203ENST00000412570 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
SMPD4-203ENST00000412570 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
SMPD4-203ENST00000412570 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
SMPD4-203ENST00000412570 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
SMPD4-203ENST00000412570 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
SMPD4-203ENST00000412570 MT3P25713 68 aa2.6□□□□□ -1.99
SMPD4-203ENST00000412570 LCE3DQ9BYE3 92 aa2.59□□□□□ -2
SMPD4-203ENST00000412570 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
SMPD4-203ENST00000412570 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SMPD4-203ENST00000412570 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SMPD4-203ENST00000412570 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
SMPD4-203ENST00000412570 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
SMPD4-203ENST00000412570 PRM1P04553 51 aa2.41□□□□□ -2.02
SMPD4-203ENST00000412570 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
SMPD4-203ENST00000412570 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
SMPD4-203ENST00000412570 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SMPD4-203ENST00000412570 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
SMPD4-203ENST00000412570 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
SMPD4-203ENST00000412570 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
SMPD4-203ENST00000412570 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
SMPD4-203ENST00000412570 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SMPD4-203ENST00000412570 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
SMPD4-203ENST00000412570 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
SMPD4-203ENST00000412570 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
SMPD4-203ENST00000412570 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
SMPD4-203ENST00000412570 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
SMPD4-203ENST00000412570 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SMPD4-203ENST00000412570 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SMPD4-203ENST00000412570 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SMPD4-203ENST00000412570 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
SMPD4-203ENST00000412570 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SMPD4-203ENST00000412570 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SMPD4-203ENST00000412570 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
SMPD4-203ENST00000412570 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SMPD4-203ENST00000412570 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
SMPD4-203ENST00000412570 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 280.2 ms