RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 MT1MQ8N339 61 aa7.83□□□□□ -1.16
CROT-202ENST00000412227 MT1LQ93083 61 aa7.79□□□□□ -1.16
CROT-202ENST00000412227 HMCN1Q96RW7 5635 aa7.77□□□□□ -1.17
CROT-202ENST00000412227 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
CROT-202ENST00000412227 KRTAP4-2Q9BYR5 136 aa7.71□□□□□ -1.18
CROT-202ENST00000412227 A8MU10 97 aa7.7□□□□□ -1.18
CROT-202ENST00000412227 TMEM258P61165 79 aa7.69□□□□□ -1.18
CROT-202ENST00000412227 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
CROT-202ENST00000412227 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CROT-202ENST00000412227 KRTAP4-11Q9BYQ6 195 aa7.66□□□□□ -1.18
CROT-202ENST00000412227 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
CROT-202ENST00000412227 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
CROT-202ENST00000412227 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
CROT-202ENST00000412227 KRTAP5-4Q6L8H1 288 aa7.63□□□□□ -1.19
CROT-202ENST00000412227 TNP1P09430 55 aa7.6□□□□□ -1.19
CROT-202ENST00000412227 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
CROT-202ENST00000412227 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
CROT-202ENST00000412227 KRTAP5-10Q6L8G5 202 aa7.51□□□□□ -1.21
CROT-202ENST00000412227 UQCR11O14957 56 aa7.42□□□□□ -1.22
CROT-202ENST00000412227 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
CROT-202ENST00000412227 KRTAP5-3Q6L8H2 238 aa7.29□□□□□ -1.24
CROT-202ENST00000412227 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
CROT-202ENST00000412227 KRTAP5-7Q6L8G8 165 aa7.26□□□□□ -1.25
CROT-202ENST00000412227 KRTAP20-2Q3LI61 65 aa7.23□□□□□ -1.25
CROT-202ENST00000412227 V9GYY9 64 aa7.23□□□□□ -1.25
CROT-202ENST00000412227 Q1T7F1 81 aa7.21□□□□□ -1.26
CROT-202ENST00000412227 KRTAP5-5Q701N2 237 aaPredicted RBP7.19□□□□□ -1.26
CROT-202ENST00000412227 PSPHP1O15172 72 aa7.17□□□□□ -1.26
CROT-202ENST00000412227 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
CROT-202ENST00000412227 KRTAP12-4P60329 112 aa7.12□□□□□ -1.27
CROT-202ENST00000412227 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
CROT-202ENST00000412227 K7ERS5 55 aa7.07□□□□□ -1.28
CROT-202ENST00000412227 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
CROT-202ENST00000412227 SYNE1Q8NF91 8797 aaKnown RBP6.95□□□□□ -1.3
CROT-202ENST00000412227 A6NED7 52 aa6.93□□□□□ -1.3
CROT-202ENST00000412227 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
CROT-202ENST00000412227 PCP4P48539 62 aa6.87□□□□□ -1.31
CROT-202ENST00000412227 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
CROT-202ENST00000412227 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
CROT-202ENST00000412227 ROMO1P60602 79 aa6.65□□□□□ -1.34
CROT-202ENST00000412227 MT1AP04731 61 aa6.62□□□□□ -1.35
CROT-202ENST00000412227 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
CROT-202ENST00000412227 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
CROT-202ENST00000412227 KRTAP5-8O75690 187 aa6.46□□□□□ -1.38
CROT-202ENST00000412227 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
CROT-202ENST00000412227 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
CROT-202ENST00000412227 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
CROT-202ENST00000412227 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
CROT-202ENST00000412227 AHNAKQ09666 5890 aaKnown RBP6.29□□□□□ -1.4
CROT-202ENST00000412227 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
CROT-202ENST00000412227 MT3P25713 68 aa6.08□□□□□ -1.44
CROT-202ENST00000412227 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
CROT-202ENST00000412227 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
CROT-202ENST00000412227 KRTAP5-1Q6L8H4 278 aa6□□□□□ -1.45
CROT-202ENST00000412227 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
CROT-202ENST00000412227 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
CROT-202ENST00000412227 LCE1EQ5T753 118 aa5.64□□□□□ -1.51
CROT-202ENST00000412227 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
CROT-202ENST00000412227 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
CROT-202ENST00000412227 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
CROT-202ENST00000412227 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.28□□□□□ -1.56
CROT-202ENST00000412227 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
CROT-202ENST00000412227 KRTAP5-11Q6L8G4 156 aa5.14□□□□□ -1.59
CROT-202ENST00000412227 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
CROT-202ENST00000412227 LCE1FQ5T754 118 aa4.9□□□□□ -1.63
CROT-202ENST00000412227 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
CROT-202ENST00000412227 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CROT-202ENST00000412227 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
CROT-202ENST00000412227 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
CROT-202ENST00000412227 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
CROT-202ENST00000412227 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
CROT-202ENST00000412227 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
CROT-202ENST00000412227 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
CROT-202ENST00000412227 PRM1P04553 51 aa3.41□□□□□ -1.86
CROT-202ENST00000412227 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
CROT-202ENST00000412227 INE1O15225 51 aa2.99□□□□□ -1.93
CROT-202ENST00000412227 MUC16Q8WXI7 14507 aa2.76□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 133.7 ms