RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
CRKL-202ENST00000411769 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
CRKL-202ENST00000411769 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
CRKL-202ENST00000411769 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
CRKL-202ENST00000411769 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
CRKL-202ENST00000411769 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
CRKL-202ENST00000411769 MT1EP04732 61 aa6.91□□□□□ -1.3
CRKL-202ENST00000411769 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
CRKL-202ENST00000411769 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
CRKL-202ENST00000411769 NEBP20929 6669 aa6.82□□□□□ -1.32
CRKL-202ENST00000411769 MT1LQ93083 61 aa6.76□□□□□ -1.33
CRKL-202ENST00000411769 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
CRKL-202ENST00000411769 SPRR2EP22531 72 aa6.67□□□□□ -1.34
CRKL-202ENST00000411769 SPRR2BP35325 72 aa6.67□□□□□ -1.34
CRKL-202ENST00000411769 SPRR2AP35326 72 aa6.67□□□□□ -1.34
CRKL-202ENST00000411769 INE1O15225 51 aa6.64□□□□□ -1.35
CRKL-202ENST00000411769 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
CRKL-202ENST00000411769 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
CRKL-202ENST00000411769 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
CRKL-202ENST00000411769 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
CRKL-202ENST00000411769 MT1GP13640 62 aa6.54□□□□□ -1.36
CRKL-202ENST00000411769 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
CRKL-202ENST00000411769 MT1MQ8N339 61 aa6.51□□□□□ -1.37
CRKL-202ENST00000411769 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
CRKL-202ENST00000411769 SPRR2DP22532 72 aa6.42□□□□□ -1.38
CRKL-202ENST00000411769 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
CRKL-202ENST00000411769 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
CRKL-202ENST00000411769 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
CRKL-202ENST00000411769 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
CRKL-202ENST00000411769 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
CRKL-202ENST00000411769 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
CRKL-202ENST00000411769 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
CRKL-202ENST00000411769 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
CRKL-202ENST00000411769 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
CRKL-202ENST00000411769 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
CRKL-202ENST00000411769 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
CRKL-202ENST00000411769 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
CRKL-202ENST00000411769 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
CRKL-202ENST00000411769 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
CRKL-202ENST00000411769 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
CRKL-202ENST00000411769 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
CRKL-202ENST00000411769 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
CRKL-202ENST00000411769 MT1AP04731 61 aa5.72□□□□□ -1.49
CRKL-202ENST00000411769 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
CRKL-202ENST00000411769 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
CRKL-202ENST00000411769 MT4P47944 62 aa5.63□□□□□ -1.51
CRKL-202ENST00000411769 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
CRKL-202ENST00000411769 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
CRKL-202ENST00000411769 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
CRKL-202ENST00000411769 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
CRKL-202ENST00000411769 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
CRKL-202ENST00000411769 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
CRKL-202ENST00000411769 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.58
CRKL-202ENST00000411769 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
CRKL-202ENST00000411769 MT3P25713 68 aa5.18□□□□□ -1.58
CRKL-202ENST00000411769 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
CRKL-202ENST00000411769 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
CRKL-202ENST00000411769 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
CRKL-202ENST00000411769 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
CRKL-202ENST00000411769 PRM1P04553 51 aa4.93□□□□□ -1.62
CRKL-202ENST00000411769 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
CRKL-202ENST00000411769 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
CRKL-202ENST00000411769 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
CRKL-202ENST00000411769 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
CRKL-202ENST00000411769 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
CRKL-202ENST00000411769 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CRKL-202ENST00000411769 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CRKL-202ENST00000411769 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
CRKL-202ENST00000411769 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
CRKL-202ENST00000411769 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
CRKL-202ENST00000411769 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
CRKL-202ENST00000411769 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
CRKL-202ENST00000411769 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CRKL-202ENST00000411769 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CRKL-202ENST00000411769 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
CRKL-202ENST00000411769 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
CRKL-202ENST00000411769 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CRKL-202ENST00000411769 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms