RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
NEDD1-202ENST00000411739 K7ERS5 55 aa4.34□□□□□ -1.72
NEDD1-202ENST00000411739 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.72
NEDD1-202ENST00000411739 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
NEDD1-202ENST00000411739 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
NEDD1-202ENST00000411739 MT1LQ93083 61 aa4.27□□□□□ -1.73
NEDD1-202ENST00000411739 MT1GP13640 62 aa4.26□□□□□ -1.73
NEDD1-202ENST00000411739 H3BS24 57 aa4.25□□□□□ -1.73
NEDD1-202ENST00000411739 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
NEDD1-202ENST00000411739 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
NEDD1-202ENST00000411739 MT1MQ8N339 61 aa4.22□□□□□ -1.73
NEDD1-202ENST00000411739 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
NEDD1-202ENST00000411739 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
NEDD1-202ENST00000411739 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
NEDD1-202ENST00000411739 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
NEDD1-202ENST00000411739 ROMO1P60602 79 aa4.11□□□□□ -1.75
NEDD1-202ENST00000411739 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
NEDD1-202ENST00000411739 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
NEDD1-202ENST00000411739 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
NEDD1-202ENST00000411739 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
NEDD1-202ENST00000411739 MT4P47944 62 aa3.96□□□□□ -1.78
NEDD1-202ENST00000411739 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
NEDD1-202ENST00000411739 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
NEDD1-202ENST00000411739 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
NEDD1-202ENST00000411739 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.78
NEDD1-202ENST00000411739 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
NEDD1-202ENST00000411739 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
NEDD1-202ENST00000411739 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
NEDD1-202ENST00000411739 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
NEDD1-202ENST00000411739 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
NEDD1-202ENST00000411739 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
NEDD1-202ENST00000411739 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
NEDD1-202ENST00000411739 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
NEDD1-202ENST00000411739 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
NEDD1-202ENST00000411739 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
NEDD1-202ENST00000411739 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
NEDD1-202ENST00000411739 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
NEDD1-202ENST00000411739 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
NEDD1-202ENST00000411739 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
NEDD1-202ENST00000411739 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
NEDD1-202ENST00000411739 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
NEDD1-202ENST00000411739 MT1AP04731 61 aa3.61□□□□□ -1.83
NEDD1-202ENST00000411739 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
NEDD1-202ENST00000411739 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
NEDD1-202ENST00000411739 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
NEDD1-202ENST00000411739 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
NEDD1-202ENST00000411739 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
NEDD1-202ENST00000411739 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
NEDD1-202ENST00000411739 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
NEDD1-202ENST00000411739 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
NEDD1-202ENST00000411739 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
NEDD1-202ENST00000411739 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
NEDD1-202ENST00000411739 MT3P25713 68 aa3.3□□□□□ -1.88
NEDD1-202ENST00000411739 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
NEDD1-202ENST00000411739 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
NEDD1-202ENST00000411739 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
NEDD1-202ENST00000411739 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
NEDD1-202ENST00000411739 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
NEDD1-202ENST00000411739 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
NEDD1-202ENST00000411739 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
NEDD1-202ENST00000411739 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
NEDD1-202ENST00000411739 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
NEDD1-202ENST00000411739 NDUFAF8A1L188 74 aa2.84□□□□□ -1.96
NEDD1-202ENST00000411739 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.96
NEDD1-202ENST00000411739 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
NEDD1-202ENST00000411739 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
NEDD1-202ENST00000411739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
NEDD1-202ENST00000411739 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
NEDD1-202ENST00000411739 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
NEDD1-202ENST00000411739 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
NEDD1-202ENST00000411739 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NEDD1-202ENST00000411739 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
NEDD1-202ENST00000411739 PRM1P04553 51 aa2.15□□□□□ -2.07
NEDD1-202ENST00000411739 INE1O15225 51 aa2.14□□□□□ -2.07
NEDD1-202ENST00000411739 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
NEDD1-202ENST00000411739 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
NEDD1-202ENST00000411739 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 46.5 ms