RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
KLF4-202ENST00000411706 A6NED7 52 aa6.96□□□□□ -1.3
KLF4-202ENST00000411706 MT1GP13640 62 aa6.94□□□□□ -1.3
KLF4-202ENST00000411706 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
KLF4-202ENST00000411706 PP632Q6XCG6 107 aa6.9□□□□□ -1.3
KLF4-202ENST00000411706 MT1LQ93083 61 aa6.84□□□□□ -1.31
KLF4-202ENST00000411706 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
KLF4-202ENST00000411706 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
KLF4-202ENST00000411706 MT1MQ8N339 61 aa6.76□□□□□ -1.33
KLF4-202ENST00000411706 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
KLF4-202ENST00000411706 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
KLF4-202ENST00000411706 ROMO1P60602 79 aa6.6□□□□□ -1.35
KLF4-202ENST00000411706 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
KLF4-202ENST00000411706 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
KLF4-202ENST00000411706 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
KLF4-202ENST00000411706 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
KLF4-202ENST00000411706 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
KLF4-202ENST00000411706 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
KLF4-202ENST00000411706 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
KLF4-202ENST00000411706 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
KLF4-202ENST00000411706 MT4P47944 62 aa6.29□□□□□ -1.4
KLF4-202ENST00000411706 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
KLF4-202ENST00000411706 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
KLF4-202ENST00000411706 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
KLF4-202ENST00000411706 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
KLF4-202ENST00000411706 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
KLF4-202ENST00000411706 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
KLF4-202ENST00000411706 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
KLF4-202ENST00000411706 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
KLF4-202ENST00000411706 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
KLF4-202ENST00000411706 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
KLF4-202ENST00000411706 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
KLF4-202ENST00000411706 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
KLF4-202ENST00000411706 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
KLF4-202ENST00000411706 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
KLF4-202ENST00000411706 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
KLF4-202ENST00000411706 MT1AP04731 61 aa5.84□□□□□ -1.47
KLF4-202ENST00000411706 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
KLF4-202ENST00000411706 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
KLF4-202ENST00000411706 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
KLF4-202ENST00000411706 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
KLF4-202ENST00000411706 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
KLF4-202ENST00000411706 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
KLF4-202ENST00000411706 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
KLF4-202ENST00000411706 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
KLF4-202ENST00000411706 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
KLF4-202ENST00000411706 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
KLF4-202ENST00000411706 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
KLF4-202ENST00000411706 MT3P25713 68 aa5.36□□□□□ -1.55
KLF4-202ENST00000411706 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
KLF4-202ENST00000411706 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
KLF4-202ENST00000411706 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
KLF4-202ENST00000411706 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
KLF4-202ENST00000411706 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
KLF4-202ENST00000411706 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
KLF4-202ENST00000411706 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
KLF4-202ENST00000411706 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
KLF4-202ENST00000411706 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
KLF4-202ENST00000411706 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
KLF4-202ENST00000411706 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
KLF4-202ENST00000411706 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
KLF4-202ENST00000411706 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
KLF4-202ENST00000411706 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
KLF4-202ENST00000411706 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
KLF4-202ENST00000411706 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
KLF4-202ENST00000411706 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
KLF4-202ENST00000411706 H3BS24 57 aa4.01□□□□□ -1.77
KLF4-202ENST00000411706 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
KLF4-202ENST00000411706 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
KLF4-202ENST00000411706 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
KLF4-202ENST00000411706 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
KLF4-202ENST00000411706 INE1O15225 51 aa3.68□□□□□ -1.82
KLF4-202ENST00000411706 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
KLF4-202ENST00000411706 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
KLF4-202ENST00000411706 PRM1P04553 51 aa3.36□□□□□ -1.87
KLF4-202ENST00000411706 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
KLF4-202ENST00000411706 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
KLF4-202ENST00000411706 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 104.7 ms