RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 Q1T7F1 81 aa6.18□□□□□ -1.42
MRPL55-220ENST00000411464 V9GYY9 64 aa6.18□□□□□ -1.42
MRPL55-220ENST00000411464 A0A0D9SG42 100 aa6.12□□□□□ -1.43
MRPL55-220ENST00000411464 PSPHP1O15172 72 aa6.12□□□□□ -1.43
MRPL55-220ENST00000411464 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
MRPL55-220ENST00000411464 MT1GP13640 62 aa6.1□□□□□ -1.43
MRPL55-220ENST00000411464 MT4P47944 62 aa6.1□□□□□ -1.43
MRPL55-220ENST00000411464 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
MRPL55-220ENST00000411464 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
MRPL55-220ENST00000411464 A8MU10 97 aa6.06□□□□□ -1.44
MRPL55-220ENST00000411464 UQCR11O14957 56 aa6.06□□□□□ -1.44
MRPL55-220ENST00000411464 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
MRPL55-220ENST00000411464 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
MRPL55-220ENST00000411464 KRTAP12-1P59990 96 aa6□□□□□ -1.45
MRPL55-220ENST00000411464 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
MRPL55-220ENST00000411464 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
MRPL55-220ENST00000411464 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
MRPL55-220ENST00000411464 MT1MQ8N339 61 aa5.96□□□□□ -1.46
MRPL55-220ENST00000411464 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
MRPL55-220ENST00000411464 A6NED7 52 aa5.93□□□□□ -1.46
MRPL55-220ENST00000411464 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
MRPL55-220ENST00000411464 MT1LQ93083 61 aa5.9□□□□□ -1.46
MRPL55-220ENST00000411464 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
MRPL55-220ENST00000411464 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
MRPL55-220ENST00000411464 K7ERS5 55 aa5.76□□□□□ -1.49
MRPL55-220ENST00000411464 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
MRPL55-220ENST00000411464 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
MRPL55-220ENST00000411464 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
MRPL55-220ENST00000411464 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
MRPL55-220ENST00000411464 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
MRPL55-220ENST00000411464 TNP1P09430 55 aa5.65□□□□□ -1.5
MRPL55-220ENST00000411464 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
MRPL55-220ENST00000411464 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
MRPL55-220ENST00000411464 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
MRPL55-220ENST00000411464 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
MRPL55-220ENST00000411464 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
MRPL55-220ENST00000411464 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
MRPL55-220ENST00000411464 ROMO1P60602 79 aa5.47□□□□□ -1.53
MRPL55-220ENST00000411464 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
MRPL55-220ENST00000411464 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
MRPL55-220ENST00000411464 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
MRPL55-220ENST00000411464 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
MRPL55-220ENST00000411464 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
MRPL55-220ENST00000411464 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
MRPL55-220ENST00000411464 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
MRPL55-220ENST00000411464 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
MRPL55-220ENST00000411464 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
MRPL55-220ENST00000411464 MT1AP04731 61 aa5.01□□□□□ -1.61
MRPL55-220ENST00000411464 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
MRPL55-220ENST00000411464 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
MRPL55-220ENST00000411464 PRAC1Q96KF2 57 aa5□□□□□ -1.61
MRPL55-220ENST00000411464 MUC5ACP98088 5654 aa5□□□□□ -1.61
MRPL55-220ENST00000411464 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
MRPL55-220ENST00000411464 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
MRPL55-220ENST00000411464 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
MRPL55-220ENST00000411464 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
MRPL55-220ENST00000411464 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
MRPL55-220ENST00000411464 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
MRPL55-220ENST00000411464 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
MRPL55-220ENST00000411464 MT3P25713 68 aa4.63□□□□□ -1.67
MRPL55-220ENST00000411464 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
MRPL55-220ENST00000411464 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
MRPL55-220ENST00000411464 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
MRPL55-220ENST00000411464 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
MRPL55-220ENST00000411464 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
MRPL55-220ENST00000411464 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
MRPL55-220ENST00000411464 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
MRPL55-220ENST00000411464 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
MRPL55-220ENST00000411464 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
MRPL55-220ENST00000411464 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
MRPL55-220ENST00000411464 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
MRPL55-220ENST00000411464 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
MRPL55-220ENST00000411464 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
MRPL55-220ENST00000411464 INE1O15225 51 aa3.19□□□□□ -1.9
MRPL55-220ENST00000411464 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
MRPL55-220ENST00000411464 PRM1P04553 51 aa2.83□□□□□ -1.96
MRPL55-220ENST00000411464 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
MRPL55-220ENST00000411464 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms