RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 KRTAP2-1Q9BYU5 128 aa8.64□□□□□ -1.03
R3HCC1-202ENST00000411463 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
R3HCC1-202ENST00000411463 KRTAP19-3Q7Z4W3 81 aa8.62□□□□□ -1.03
R3HCC1-202ENST00000411463 LCE3BQ5TA77 95 aa8.6□□□□□ -1.03
R3HCC1-202ENST00000411463 LCE5AQ5TCM9 118 aa8.6□□□□□ -1.03
R3HCC1-202ENST00000411463 PMAIP1Q13794 54 aa8.49□□□□□ -1.05
R3HCC1-202ENST00000411463 MT1GP13640 62 aa8.45□□□□□ -1.06
R3HCC1-202ENST00000411463 KRTAP25-1Q3LHN0 102 aa8.41□□□□□ -1.06
R3HCC1-202ENST00000411463 MT1LQ93083 61 aa8.4□□□□□ -1.06
R3HCC1-202ENST00000411463 DSTQ03001 7570 aaKnown RBP8.4□□□□□ -1.06
R3HCC1-202ENST00000411463 PP632Q6XCG6 107 aa8.38□□□□□ -1.07
R3HCC1-202ENST00000411463 ROMO1P60602 79 aa8.35□□□□□ -1.07
R3HCC1-202ENST00000411463 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
R3HCC1-202ENST00000411463 MT1MQ8N339 61 aa8.3□□□□□ -1.08
R3HCC1-202ENST00000411463 KRTAP23-1A1A580 65 aa8.11□□□□□ -1.11
R3HCC1-202ENST00000411463 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
R3HCC1-202ENST00000411463 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
R3HCC1-202ENST00000411463 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
R3HCC1-202ENST00000411463 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
R3HCC1-202ENST00000411463 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
R3HCC1-202ENST00000411463 KRTAP19-4Q3LI73 84 aa7.86□□□□□ -1.15
R3HCC1-202ENST00000411463 KRTAP15-1Q3LI76 137 aa7.86□□□□□ -1.15
R3HCC1-202ENST00000411463 LCE4AQ5TA78 99 aa7.85□□□□□ -1.15
R3HCC1-202ENST00000411463 LCE1DQ5T752 114 aa7.77□□□□□ -1.17
R3HCC1-202ENST00000411463 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
R3HCC1-202ENST00000411463 MT4P47944 62 aa7.73□□□□□ -1.17
R3HCC1-202ENST00000411463 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
R3HCC1-202ENST00000411463 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
R3HCC1-202ENST00000411463 KRTAP5-5Q701N2 237 aaPredicted RBP7.58□□□□□ -1.2
R3HCC1-202ENST00000411463 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
R3HCC1-202ENST00000411463 KRTAP4-6Q9BYQ5 205 aa7.54□□□□□ -1.2
R3HCC1-202ENST00000411463 GPR98Q8WXG9 6306 aa7.45□□□□□ -1.22
R3HCC1-202ENST00000411463 KRTAP12-4P60329 112 aa7.34□□□□□ -1.23
R3HCC1-202ENST00000411463 SPRR5A0A1B0GTR4 108 aa7.3□□□□□ -1.24
R3HCC1-202ENST00000411463 KRTAP20-2Q3LI61 65 aa7.3□□□□□ -1.24
R3HCC1-202ENST00000411463 SYNE1Q8NF91 8797 aaKnown RBP7.27□□□□□ -1.25
R3HCC1-202ENST00000411463 H3BS24 57 aa7.24□□□□□ -1.25
R3HCC1-202ENST00000411463 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
R3HCC1-202ENST00000411463 AHNAK2Q8IVF2 5795 aa7.21□□□□□ -1.26
R3HCC1-202ENST00000411463 MT1AP04731 61 aa7.15□□□□□ -1.27
R3HCC1-202ENST00000411463 KRTAP6-1Q3LI64 71 aa7.09□□□□□ -1.27
R3HCC1-202ENST00000411463 KRTAP5-10Q6L8G5 202 aa7.07□□□□□ -1.28
R3HCC1-202ENST00000411463 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
R3HCC1-202ENST00000411463 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
R3HCC1-202ENST00000411463 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
R3HCC1-202ENST00000411463 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
R3HCC1-202ENST00000411463 KRTAP6-2Q3LI66 62 aa6.73□□□□□ -1.33
R3HCC1-202ENST00000411463 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
R3HCC1-202ENST00000411463 MT3P25713 68 aa6.54□□□□□ -1.36
R3HCC1-202ENST00000411463 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
R3HCC1-202ENST00000411463 OBSCNQ5VST9 7968 aa6.46□□□□□ -1.38
R3HCC1-202ENST00000411463 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
R3HCC1-202ENST00000411463 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
R3HCC1-202ENST00000411463 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
R3HCC1-202ENST00000411463 KRTAP5-1Q6L8H4 278 aa6.09□□□□□ -1.44
R3HCC1-202ENST00000411463 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
R3HCC1-202ENST00000411463 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
R3HCC1-202ENST00000411463 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
R3HCC1-202ENST00000411463 MUC5BQ9HC84 5762 aaPredicted RBP5.9□□□□□ -1.46
R3HCC1-202ENST00000411463 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
R3HCC1-202ENST00000411463 LCE3DQ9BYE3 92 aa5.59□□□□□ -1.51
R3HCC1-202ENST00000411463 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
R3HCC1-202ENST00000411463 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
R3HCC1-202ENST00000411463 LCE1CQ5T751 118 aa5.51□□□□□ -1.53
R3HCC1-202ENST00000411463 INE1O15225 51 aa5.38□□□□□ -1.55
R3HCC1-202ENST00000411463 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
R3HCC1-202ENST00000411463 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
R3HCC1-202ENST00000411463 KRTAP5-11Q6L8G4 156 aa4.95□□□□□ -1.62
R3HCC1-202ENST00000411463 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
R3HCC1-202ENST00000411463 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
R3HCC1-202ENST00000411463 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
R3HCC1-202ENST00000411463 PRM1P04553 51 aa4.31□□□□□ -1.72
R3HCC1-202ENST00000411463 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
R3HCC1-202ENST00000411463 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
R3HCC1-202ENST00000411463 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
R3HCC1-202ENST00000411463 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
R3HCC1-202ENST00000411463 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms