RNA–Protein interactions for RNA: ENST00000409935.5

IMP4-203, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5 BASIC

Gene IMP4, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-203ENST00000409935 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
IMP4-203ENST00000409935 TNP1P09430 55 aa5.82□□□□□ -1.48
IMP4-203ENST00000409935 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
IMP4-203ENST00000409935 A8MU10 97 aa5.81□□□□□ -1.48
IMP4-203ENST00000409935 A0A1B0GU69 56 aa5.8□□□□□ -1.48
IMP4-203ENST00000409935 TMEM258P61165 79 aa5.79□□□□□ -1.48
IMP4-203ENST00000409935 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
IMP4-203ENST00000409935 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
IMP4-203ENST00000409935 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
IMP4-203ENST00000409935 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
IMP4-203ENST00000409935 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
IMP4-203ENST00000409935 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
IMP4-203ENST00000409935 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
IMP4-203ENST00000409935 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
IMP4-203ENST00000409935 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
IMP4-203ENST00000409935 PCP4P48539 62 aa5.58□□□□□ -1.52
IMP4-203ENST00000409935 PSPHP1O15172 72 aa5.48□□□□□ -1.53
IMP4-203ENST00000409935 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
IMP4-203ENST00000409935 UQCR11O14957 56 aa5.46□□□□□ -1.54
IMP4-203ENST00000409935 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
IMP4-203ENST00000409935 Q1T7F1 81 aa5.43□□□□□ -1.54
IMP4-203ENST00000409935 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
IMP4-203ENST00000409935 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.54
IMP4-203ENST00000409935 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
IMP4-203ENST00000409935 V9GYY9 64 aa5.4□□□□□ -1.54
IMP4-203ENST00000409935 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
IMP4-203ENST00000409935 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
IMP4-203ENST00000409935 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
IMP4-203ENST00000409935 A6NED7 52 aa5.26□□□□□ -1.57
IMP4-203ENST00000409935 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
IMP4-203ENST00000409935 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
IMP4-203ENST00000409935 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
IMP4-203ENST00000409935 K7ERS5 55 aa5.18□□□□□ -1.58
IMP4-203ENST00000409935 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
IMP4-203ENST00000409935 MT1AP04731 61 aa5.12□□□□□ -1.59
IMP4-203ENST00000409935 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
IMP4-203ENST00000409935 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
IMP4-203ENST00000409935 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
IMP4-203ENST00000409935 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
IMP4-203ENST00000409935 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
IMP4-203ENST00000409935 ROMO1P60602 79 aa4.93□□□□□ -1.62
IMP4-203ENST00000409935 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
IMP4-203ENST00000409935 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
IMP4-203ENST00000409935 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
IMP4-203ENST00000409935 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
IMP4-203ENST00000409935 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
IMP4-203ENST00000409935 H3BS24 57 aa4.79□□□□□ -1.64
IMP4-203ENST00000409935 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
IMP4-203ENST00000409935 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
IMP4-203ENST00000409935 MT3P25713 68 aa4.7□□□□□ -1.66
IMP4-203ENST00000409935 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
IMP4-203ENST00000409935 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
IMP4-203ENST00000409935 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
IMP4-203ENST00000409935 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
IMP4-203ENST00000409935 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
IMP4-203ENST00000409935 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
IMP4-203ENST00000409935 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
IMP4-203ENST00000409935 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
IMP4-203ENST00000409935 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
IMP4-203ENST00000409935 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
IMP4-203ENST00000409935 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
IMP4-203ENST00000409935 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
IMP4-203ENST00000409935 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
IMP4-203ENST00000409935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
IMP4-203ENST00000409935 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
IMP4-203ENST00000409935 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
IMP4-203ENST00000409935 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
IMP4-203ENST00000409935 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
IMP4-203ENST00000409935 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
IMP4-203ENST00000409935 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
IMP4-203ENST00000409935 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
IMP4-203ENST00000409935 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
IMP4-203ENST00000409935 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
IMP4-203ENST00000409935 PRM1P04553 51 aa2.58□□□□□ -2
IMP4-203ENST00000409935 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
IMP4-203ENST00000409935 INE1O15225 51 aa2.43□□□□□ -2.02
IMP4-203ENST00000409935 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 73.8 ms