RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SPRR2AP35326 72 aa4.52□□□□□ -1.69
PMS1-204ENST00000409823 NEBP20929 6669 aa4.51□□□□□ -1.69
PMS1-204ENST00000409823 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
PMS1-204ENST00000409823 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
PMS1-204ENST00000409823 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
PMS1-204ENST00000409823 MT1LQ93083 61 aa4.48□□□□□ -1.69
PMS1-204ENST00000409823 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
PMS1-204ENST00000409823 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
PMS1-204ENST00000409823 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
PMS1-204ENST00000409823 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
PMS1-204ENST00000409823 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
PMS1-204ENST00000409823 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
PMS1-204ENST00000409823 MT1GP13640 62 aa4.38□□□□□ -1.71
PMS1-204ENST00000409823 MT1MQ8N339 61 aa4.36□□□□□ -1.71
PMS1-204ENST00000409823 SPRR2DP22532 72 aa4.35□□□□□ -1.71
PMS1-204ENST00000409823 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
PMS1-204ENST00000409823 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
PMS1-204ENST00000409823 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
PMS1-204ENST00000409823 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
PMS1-204ENST00000409823 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
PMS1-204ENST00000409823 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
PMS1-204ENST00000409823 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
PMS1-204ENST00000409823 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
PMS1-204ENST00000409823 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
PMS1-204ENST00000409823 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
PMS1-204ENST00000409823 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
PMS1-204ENST00000409823 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
PMS1-204ENST00000409823 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
PMS1-204ENST00000409823 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PMS1-204ENST00000409823 MT4P47944 62 aa3.84□□□□□ -1.79
PMS1-204ENST00000409823 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
PMS1-204ENST00000409823 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
PMS1-204ENST00000409823 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
PMS1-204ENST00000409823 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
PMS1-204ENST00000409823 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
PMS1-204ENST00000409823 MT1AP04731 61 aa3.78□□□□□ -1.8
PMS1-204ENST00000409823 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
PMS1-204ENST00000409823 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
PMS1-204ENST00000409823 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
PMS1-204ENST00000409823 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
PMS1-204ENST00000409823 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PMS1-204ENST00000409823 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
PMS1-204ENST00000409823 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
PMS1-204ENST00000409823 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
PMS1-204ENST00000409823 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PMS1-204ENST00000409823 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
PMS1-204ENST00000409823 MT3P25713 68 aa3.44□□□□□ -1.86
PMS1-204ENST00000409823 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
PMS1-204ENST00000409823 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
PMS1-204ENST00000409823 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
PMS1-204ENST00000409823 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
PMS1-204ENST00000409823 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
PMS1-204ENST00000409823 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
PMS1-204ENST00000409823 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
PMS1-204ENST00000409823 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
PMS1-204ENST00000409823 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
PMS1-204ENST00000409823 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
PMS1-204ENST00000409823 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
PMS1-204ENST00000409823 LCE1EQ5T753 118 aa3□□□□□ -1.93
PMS1-204ENST00000409823 MUC5ACP98088 5654 aa3□□□□□ -1.93
PMS1-204ENST00000409823 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
PMS1-204ENST00000409823 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
PMS1-204ENST00000409823 H3BS24 57 aa2.92□□□□□ -1.94
PMS1-204ENST00000409823 INE1O15225 51 aa2.87□□□□□ -1.95
PMS1-204ENST00000409823 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
PMS1-204ENST00000409823 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
PMS1-204ENST00000409823 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PMS1-204ENST00000409823 PRM1P04553 51 aa2.63□□□□□ -1.99
PMS1-204ENST00000409823 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
PMS1-204ENST00000409823 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
PMS1-204ENST00000409823 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
PMS1-204ENST00000409823 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
PMS1-204ENST00000409823 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
PMS1-204ENST00000409823 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PMS1-204ENST00000409823 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
PMS1-204ENST00000409823 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PMS1-204ENST00000409823 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 91.3 ms