RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MT1EP04732 61 aa5.4□□□□□ -1.54
NIF3L1-205ENST00000409588 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
NIF3L1-205ENST00000409588 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
NIF3L1-205ENST00000409588 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.56
NIF3L1-205ENST00000409588 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
NIF3L1-205ENST00000409588 MT1GP13640 62 aa5.32□□□□□ -1.56
NIF3L1-205ENST00000409588 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
NIF3L1-205ENST00000409588 PCP4P48539 62 aa5.31□□□□□ -1.56
NIF3L1-205ENST00000409588 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
NIF3L1-205ENST00000409588 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
NIF3L1-205ENST00000409588 A8MU10 97 aa5.26□□□□□ -1.57
NIF3L1-205ENST00000409588 TNP1P09430 55 aa5.26□□□□□ -1.57
NIF3L1-205ENST00000409588 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
NIF3L1-205ENST00000409588 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
NIF3L1-205ENST00000409588 KRTAP4-4Q9BYR3 166 aa5.23□□□□□ -1.57
NIF3L1-205ENST00000409588 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
NIF3L1-205ENST00000409588 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
NIF3L1-205ENST00000409588 MT1LQ93083 61 aa5.16□□□□□ -1.58
NIF3L1-205ENST00000409588 MT3P25713 68 aa5.15□□□□□ -1.59
NIF3L1-205ENST00000409588 MT1MQ8N339 61 aa5.14□□□□□ -1.59
NIF3L1-205ENST00000409588 UQCR11O14957 56 aa5.13□□□□□ -1.59
NIF3L1-205ENST00000409588 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
NIF3L1-205ENST00000409588 TMEM258P61165 79 aa5.12□□□□□ -1.59
NIF3L1-205ENST00000409588 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
NIF3L1-205ENST00000409588 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
NIF3L1-205ENST00000409588 KRTAP12-3P60328 96 aa5□□□□□ -1.61
NIF3L1-205ENST00000409588 K7ERS5 55 aa4.97□□□□□ -1.61
NIF3L1-205ENST00000409588 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
NIF3L1-205ENST00000409588 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
NIF3L1-205ENST00000409588 V9GYY9 64 aa4.95□□□□□ -1.62
NIF3L1-205ENST00000409588 MT4P47944 62 aa4.94□□□□□ -1.62
NIF3L1-205ENST00000409588 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
NIF3L1-205ENST00000409588 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
NIF3L1-205ENST00000409588 Q1T7F1 81 aa4.85□□□□□ -1.63
NIF3L1-205ENST00000409588 PSPHP1O15172 72 aa4.79□□□□□ -1.64
NIF3L1-205ENST00000409588 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
NIF3L1-205ENST00000409588 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
NIF3L1-205ENST00000409588 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
NIF3L1-205ENST00000409588 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
NIF3L1-205ENST00000409588 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
NIF3L1-205ENST00000409588 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
NIF3L1-205ENST00000409588 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
NIF3L1-205ENST00000409588 A6NED7 52 aa4.67□□□□□ -1.66
NIF3L1-205ENST00000409588 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
NIF3L1-205ENST00000409588 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
NIF3L1-205ENST00000409588 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
NIF3L1-205ENST00000409588 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
NIF3L1-205ENST00000409588 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
NIF3L1-205ENST00000409588 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
NIF3L1-205ENST00000409588 ROMO1P60602 79 aa4.55□□□□□ -1.68
NIF3L1-205ENST00000409588 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
NIF3L1-205ENST00000409588 MT1AP04731 61 aa4.41□□□□□ -1.7
NIF3L1-205ENST00000409588 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
NIF3L1-205ENST00000409588 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
NIF3L1-205ENST00000409588 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
NIF3L1-205ENST00000409588 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
NIF3L1-205ENST00000409588 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
NIF3L1-205ENST00000409588 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
NIF3L1-205ENST00000409588 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
NIF3L1-205ENST00000409588 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
NIF3L1-205ENST00000409588 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
NIF3L1-205ENST00000409588 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
NIF3L1-205ENST00000409588 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
NIF3L1-205ENST00000409588 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
NIF3L1-205ENST00000409588 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
NIF3L1-205ENST00000409588 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
NIF3L1-205ENST00000409588 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
NIF3L1-205ENST00000409588 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
NIF3L1-205ENST00000409588 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
NIF3L1-205ENST00000409588 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
NIF3L1-205ENST00000409588 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
NIF3L1-205ENST00000409588 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
NIF3L1-205ENST00000409588 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
NIF3L1-205ENST00000409588 INE1O15225 51 aa2.6□□□□□ -1.99
NIF3L1-205ENST00000409588 PRM1P04553 51 aa2.27□□□□□ -2.05
NIF3L1-205ENST00000409588 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
NIF3L1-205ENST00000409588 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms