RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 A6NED7 52 aa5.6□□□□□ -1.51
SUMO1-207ENST00000409498 TNP1P09430 55 aa5.6□□□□□ -1.51
SUMO1-207ENST00000409498 K7ERS5 55 aa5.59□□□□□ -1.51
SUMO1-207ENST00000409498 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
SUMO1-207ENST00000409498 SPRR2EP22531 72 aa5.58□□□□□ -1.52
SUMO1-207ENST00000409498 SPRR2BP35325 72 aa5.58□□□□□ -1.52
SUMO1-207ENST00000409498 SPRR2AP35326 72 aa5.58□□□□□ -1.52
SUMO1-207ENST00000409498 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
SUMO1-207ENST00000409498 MT1EP04732 61 aa5.48□□□□□ -1.53
SUMO1-207ENST00000409498 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SUMO1-207ENST00000409498 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
SUMO1-207ENST00000409498 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
SUMO1-207ENST00000409498 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
SUMO1-207ENST00000409498 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
SUMO1-207ENST00000409498 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
SUMO1-207ENST00000409498 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
SUMO1-207ENST00000409498 SPRR2DP22532 72 aa5.39□□□□□ -1.55
SUMO1-207ENST00000409498 KRTAP19-3Q7Z4W3 81 aa5.38□□□□□ -1.55
SUMO1-207ENST00000409498 MT1GP13640 62 aa5.31□□□□□ -1.56
SUMO1-207ENST00000409498 ROMO1P60602 79 aa5.28□□□□□ -1.56
SUMO1-207ENST00000409498 MT1LQ93083 61 aa5.28□□□□□ -1.56
SUMO1-207ENST00000409498 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SUMO1-207ENST00000409498 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
SUMO1-207ENST00000409498 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
SUMO1-207ENST00000409498 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
SUMO1-207ENST00000409498 MT1MQ8N339 61 aa5.19□□□□□ -1.58
SUMO1-207ENST00000409498 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
SUMO1-207ENST00000409498 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
SUMO1-207ENST00000409498 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SUMO1-207ENST00000409498 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
SUMO1-207ENST00000409498 MT3P25713 68 aa4.91□□□□□ -1.62
SUMO1-207ENST00000409498 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
SUMO1-207ENST00000409498 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
SUMO1-207ENST00000409498 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
SUMO1-207ENST00000409498 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
SUMO1-207ENST00000409498 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
SUMO1-207ENST00000409498 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SUMO1-207ENST00000409498 MT4P47944 62 aa4.67□□□□□ -1.66
SUMO1-207ENST00000409498 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
SUMO1-207ENST00000409498 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
SUMO1-207ENST00000409498 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
SUMO1-207ENST00000409498 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SUMO1-207ENST00000409498 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
SUMO1-207ENST00000409498 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
SUMO1-207ENST00000409498 MT1AP04731 61 aa4.52□□□□□ -1.69
SUMO1-207ENST00000409498 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
SUMO1-207ENST00000409498 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SUMO1-207ENST00000409498 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
SUMO1-207ENST00000409498 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
SUMO1-207ENST00000409498 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
SUMO1-207ENST00000409498 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
SUMO1-207ENST00000409498 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
SUMO1-207ENST00000409498 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
SUMO1-207ENST00000409498 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
SUMO1-207ENST00000409498 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
SUMO1-207ENST00000409498 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
SUMO1-207ENST00000409498 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SUMO1-207ENST00000409498 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
SUMO1-207ENST00000409498 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
SUMO1-207ENST00000409498 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
SUMO1-207ENST00000409498 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
SUMO1-207ENST00000409498 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
SUMO1-207ENST00000409498 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
SUMO1-207ENST00000409498 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
SUMO1-207ENST00000409498 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
SUMO1-207ENST00000409498 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SUMO1-207ENST00000409498 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
SUMO1-207ENST00000409498 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
SUMO1-207ENST00000409498 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
SUMO1-207ENST00000409498 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SUMO1-207ENST00000409498 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SUMO1-207ENST00000409498 INE1O15225 51 aa2.77□□□□□ -1.97
SUMO1-207ENST00000409498 PRM1P04553 51 aa2.7□□□□□ -1.98
SUMO1-207ENST00000409498 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
SUMO1-207ENST00000409498 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SUMO1-207ENST00000409498 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SUMO1-207ENST00000409498 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 136 ms