RNA–Protein interactions for RNA: ENST00000409476.5

MDH1-202, Transcript of malate dehydrogenase 1, humanhuman

TSL 5 BASIC

Gene MDH1, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-202ENST00000409476 UQCR11O14957 56 aa4.23□□□□□ -1.73
MDH1-202ENST00000409476 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
MDH1-202ENST00000409476 Q1T7F1 81 aa4.19□□□□□ -1.74
MDH1-202ENST00000409476 V9GYY9 64 aa4.18□□□□□ -1.74
MDH1-202ENST00000409476 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
MDH1-202ENST00000409476 SPRR2EP22531 72 aa4.16□□□□□ -1.74
MDH1-202ENST00000409476 SPRR2BP35325 72 aa4.16□□□□□ -1.74
MDH1-202ENST00000409476 SPRR2AP35326 72 aa4.16□□□□□ -1.74
MDH1-202ENST00000409476 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
MDH1-202ENST00000409476 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
MDH1-202ENST00000409476 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
MDH1-202ENST00000409476 MT3P25713 68 aa4.11□□□□□ -1.75
MDH1-202ENST00000409476 A6NED7 52 aa4.09□□□□□ -1.75
MDH1-202ENST00000409476 TNP1P09430 55 aa4.07□□□□□ -1.76
MDH1-202ENST00000409476 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
MDH1-202ENST00000409476 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
MDH1-202ENST00000409476 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
MDH1-202ENST00000409476 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
MDH1-202ENST00000409476 K7ERS5 55 aa4.02□□□□□ -1.77
MDH1-202ENST00000409476 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
MDH1-202ENST00000409476 SPRR2DP22532 72 aa4□□□□□ -1.77
MDH1-202ENST00000409476 MT1EP04732 61 aa3.98□□□□□ -1.77
MDH1-202ENST00000409476 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
MDH1-202ENST00000409476 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
MDH1-202ENST00000409476 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
MDH1-202ENST00000409476 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
MDH1-202ENST00000409476 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
MDH1-202ENST00000409476 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
MDH1-202ENST00000409476 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
MDH1-202ENST00000409476 MT1LQ93083 61 aa3.84□□□□□ -1.79
MDH1-202ENST00000409476 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
MDH1-202ENST00000409476 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
MDH1-202ENST00000409476 MT1GP13640 62 aa3.83□□□□□ -1.8
MDH1-202ENST00000409476 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
MDH1-202ENST00000409476 ROMO1P60602 79 aa3.82□□□□□ -1.8
MDH1-202ENST00000409476 MT1MQ8N339 61 aa3.79□□□□□ -1.8
MDH1-202ENST00000409476 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
MDH1-202ENST00000409476 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
MDH1-202ENST00000409476 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
MDH1-202ENST00000409476 MT4P47944 62 aa3.55□□□□□ -1.84
MDH1-202ENST00000409476 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
MDH1-202ENST00000409476 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
MDH1-202ENST00000409476 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
MDH1-202ENST00000409476 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
MDH1-202ENST00000409476 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
MDH1-202ENST00000409476 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
MDH1-202ENST00000409476 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
MDH1-202ENST00000409476 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
MDH1-202ENST00000409476 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
MDH1-202ENST00000409476 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
MDH1-202ENST00000409476 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
MDH1-202ENST00000409476 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
MDH1-202ENST00000409476 MT1AP04731 61 aa3.25□□□□□ -1.89
MDH1-202ENST00000409476 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
MDH1-202ENST00000409476 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
MDH1-202ENST00000409476 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
MDH1-202ENST00000409476 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
MDH1-202ENST00000409476 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
MDH1-202ENST00000409476 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
MDH1-202ENST00000409476 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
MDH1-202ENST00000409476 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
MDH1-202ENST00000409476 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
MDH1-202ENST00000409476 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
MDH1-202ENST00000409476 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
MDH1-202ENST00000409476 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
MDH1-202ENST00000409476 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
MDH1-202ENST00000409476 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
MDH1-202ENST00000409476 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
MDH1-202ENST00000409476 NDUFAF8A1L188 74 aa2.57□□□□□ -2
MDH1-202ENST00000409476 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
MDH1-202ENST00000409476 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
MDH1-202ENST00000409476 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
MDH1-202ENST00000409476 PRM1P04553 51 aa2.01□□□□□ -2.09
MDH1-202ENST00000409476 INE1O15225 51 aa1.96□□□□□ -2.1
MDH1-202ENST00000409476 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
MDH1-202ENST00000409476 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
MDH1-202ENST00000409476 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms