RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
LIMK2-204ENST00000406516 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
LIMK2-204ENST00000406516 INE1O15225 51 aa5.44□□□□□ -1.54
LIMK2-204ENST00000406516 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
LIMK2-204ENST00000406516 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
LIMK2-204ENST00000406516 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
LIMK2-204ENST00000406516 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
LIMK2-204ENST00000406516 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
LIMK2-204ENST00000406516 NEBP20929 6669 aa5.26□□□□□ -1.57
LIMK2-204ENST00000406516 MT1LQ93083 61 aa5.25□□□□□ -1.57
LIMK2-204ENST00000406516 MT1EP04732 61 aa5.24□□□□□ -1.57
LIMK2-204ENST00000406516 SPRR2EP22531 72 aa5.23□□□□□ -1.57
LIMK2-204ENST00000406516 SPRR2BP35325 72 aa5.23□□□□□ -1.57
LIMK2-204ENST00000406516 SPRR2AP35326 72 aa5.23□□□□□ -1.57
LIMK2-204ENST00000406516 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
LIMK2-204ENST00000406516 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
LIMK2-204ENST00000406516 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
LIMK2-204ENST00000406516 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
LIMK2-204ENST00000406516 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
LIMK2-204ENST00000406516 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.6
LIMK2-204ENST00000406516 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
LIMK2-204ENST00000406516 SPRR2DP22532 72 aa5.04□□□□□ -1.6
LIMK2-204ENST00000406516 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
LIMK2-204ENST00000406516 MT1GP13640 62 aa5□□□□□ -1.61
LIMK2-204ENST00000406516 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
LIMK2-204ENST00000406516 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
LIMK2-204ENST00000406516 MT1MQ8N339 61 aa4.94□□□□□ -1.62
LIMK2-204ENST00000406516 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
LIMK2-204ENST00000406516 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
LIMK2-204ENST00000406516 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
LIMK2-204ENST00000406516 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
LIMK2-204ENST00000406516 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
LIMK2-204ENST00000406516 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
LIMK2-204ENST00000406516 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
LIMK2-204ENST00000406516 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
LIMK2-204ENST00000406516 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
LIMK2-204ENST00000406516 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
LIMK2-204ENST00000406516 MT4P47944 62 aa4.42□□□□□ -1.7
LIMK2-204ENST00000406516 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
LIMK2-204ENST00000406516 MT1AP04731 61 aa4.39□□□□□ -1.71
LIMK2-204ENST00000406516 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
LIMK2-204ENST00000406516 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
LIMK2-204ENST00000406516 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
LIMK2-204ENST00000406516 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
LIMK2-204ENST00000406516 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
LIMK2-204ENST00000406516 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
LIMK2-204ENST00000406516 PRM1P04553 51 aa4.07□□□□□ -1.76
LIMK2-204ENST00000406516 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
LIMK2-204ENST00000406516 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
LIMK2-204ENST00000406516 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
LIMK2-204ENST00000406516 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
LIMK2-204ENST00000406516 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
LIMK2-204ENST00000406516 MT3P25713 68 aa3.95□□□□□ -1.78
LIMK2-204ENST00000406516 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
LIMK2-204ENST00000406516 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
LIMK2-204ENST00000406516 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
LIMK2-204ENST00000406516 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
LIMK2-204ENST00000406516 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
LIMK2-204ENST00000406516 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
LIMK2-204ENST00000406516 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
LIMK2-204ENST00000406516 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
LIMK2-204ENST00000406516 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
LIMK2-204ENST00000406516 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
LIMK2-204ENST00000406516 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
LIMK2-204ENST00000406516 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
LIMK2-204ENST00000406516 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
LIMK2-204ENST00000406516 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
LIMK2-204ENST00000406516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
LIMK2-204ENST00000406516 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
LIMK2-204ENST00000406516 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
LIMK2-204ENST00000406516 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
LIMK2-204ENST00000406516 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
LIMK2-204ENST00000406516 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
LIMK2-204ENST00000406516 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
LIMK2-204ENST00000406516 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LIMK2-204ENST00000406516 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
LIMK2-204ENST00000406516 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms