RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
RHBDD3-202ENST00000406335 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
RHBDD3-202ENST00000406335 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
RHBDD3-202ENST00000406335 KRTAP5-10Q6L8G5 202 aa7.54□□□□□ -1.2
RHBDD3-202ENST00000406335 MT1MQ8N339 61 aa7.5□□□□□ -1.21
RHBDD3-202ENST00000406335 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
RHBDD3-202ENST00000406335 TNP1P09430 55 aa7.47□□□□□ -1.21
RHBDD3-202ENST00000406335 V9GYY9 64 aa7.46□□□□□ -1.22
RHBDD3-202ENST00000406335 Q1T7F1 81 aa7.45□□□□□ -1.22
RHBDD3-202ENST00000406335 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
RHBDD3-202ENST00000406335 MT1LQ93083 61 aa7.41□□□□□ -1.22
RHBDD3-202ENST00000406335 KRTAP5-4Q6L8H1 288 aa7.4□□□□□ -1.22
RHBDD3-202ENST00000406335 KRTAP4-3Q9BYR4 195 aa7.37□□□□□ -1.23
RHBDD3-202ENST00000406335 UQCR11O14957 56 aa7.36□□□□□ -1.23
RHBDD3-202ENST00000406335 KRTAP5-7Q6L8G8 165 aa7.32□□□□□ -1.24
RHBDD3-202ENST00000406335 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
RHBDD3-202ENST00000406335 PSPHP1O15172 72 aa7.22□□□□□ -1.25
RHBDD3-202ENST00000406335 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
RHBDD3-202ENST00000406335 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
RHBDD3-202ENST00000406335 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
RHBDD3-202ENST00000406335 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
RHBDD3-202ENST00000406335 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
RHBDD3-202ENST00000406335 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
RHBDD3-202ENST00000406335 A6NED7 52 aa7.04□□□□□ -1.28
RHBDD3-202ENST00000406335 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
RHBDD3-202ENST00000406335 K7ERS5 55 aa7.02□□□□□ -1.29
RHBDD3-202ENST00000406335 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
RHBDD3-202ENST00000406335 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
RHBDD3-202ENST00000406335 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
RHBDD3-202ENST00000406335 KRTAP5-5Q701N2 237 aaPredicted RBP6.86□□□□□ -1.31
RHBDD3-202ENST00000406335 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
RHBDD3-202ENST00000406335 SYNE1Q8NF91 8797 aaKnown RBP6.76□□□□□ -1.33
RHBDD3-202ENST00000406335 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
RHBDD3-202ENST00000406335 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
RHBDD3-202ENST00000406335 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
RHBDD3-202ENST00000406335 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
RHBDD3-202ENST00000406335 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
RHBDD3-202ENST00000406335 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
RHBDD3-202ENST00000406335 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
RHBDD3-202ENST00000406335 ROMO1P60602 79 aa6.58□□□□□ -1.36
RHBDD3-202ENST00000406335 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
RHBDD3-202ENST00000406335 KRTAP5-8O75690 187 aa6.39□□□□□ -1.39
RHBDD3-202ENST00000406335 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
RHBDD3-202ENST00000406335 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
RHBDD3-202ENST00000406335 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
RHBDD3-202ENST00000406335 MUC5BQ9HC84 5762 aaPredicted RBP6.31□□□□□ -1.4
RHBDD3-202ENST00000406335 MT1AP04731 61 aa6.29□□□□□ -1.4
RHBDD3-202ENST00000406335 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
RHBDD3-202ENST00000406335 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
RHBDD3-202ENST00000406335 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
RHBDD3-202ENST00000406335 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
RHBDD3-202ENST00000406335 OBSCNQ5VST9 7968 aa6.17□□□□□ -1.42
RHBDD3-202ENST00000406335 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
RHBDD3-202ENST00000406335 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
RHBDD3-202ENST00000406335 MT3P25713 68 aa5.83□□□□□ -1.48
RHBDD3-202ENST00000406335 KRTAP5-1Q6L8H4 278 aa5.83□□□□□ -1.48
RHBDD3-202ENST00000406335 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
RHBDD3-202ENST00000406335 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
RHBDD3-202ENST00000406335 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
RHBDD3-202ENST00000406335 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
RHBDD3-202ENST00000406335 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
RHBDD3-202ENST00000406335 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
RHBDD3-202ENST00000406335 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
RHBDD3-202ENST00000406335 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
RHBDD3-202ENST00000406335 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
RHBDD3-202ENST00000406335 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
RHBDD3-202ENST00000406335 H3BS24 57 aa4.56□□□□□ -1.68
RHBDD3-202ENST00000406335 PHGR1C9JFL3 82 aa4.5□□□□□ -1.69
RHBDD3-202ENST00000406335 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
RHBDD3-202ENST00000406335 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
RHBDD3-202ENST00000406335 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
RHBDD3-202ENST00000406335 INE1O15225 51 aa4.22□□□□□ -1.73
RHBDD3-202ENST00000406335 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
RHBDD3-202ENST00000406335 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
RHBDD3-202ENST00000406335 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
RHBDD3-202ENST00000406335 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
RHBDD3-202ENST00000406335 PRM1P04553 51 aa3.4□□□□□ -1.87
RHBDD3-202ENST00000406335 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 92 ms