RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PP632Q6XCG6 107 aa12.03□□□□□ -0.48
CSNK1E-204ENST00000403904 KRTAP19-3Q7Z4W3 81 aa11.96□□□□□ -0.5
CSNK1E-204ENST00000403904 MT1LQ93083 61 aa11.89□□□□□ -0.51
CSNK1E-204ENST00000403904 LCE5AQ5TCM9 118 aa11.85□□□□□ -0.51
CSNK1E-204ENST00000403904 SPRR2DP22532 72 aa11.81□□□□□ -0.52
CSNK1E-204ENST00000403904 MT1GP13640 62 aa11.77□□□□□ -0.53
CSNK1E-204ENST00000403904 KRTAP15-1Q3LI76 137 aa11.64□□□□□ -0.55
CSNK1E-204ENST00000403904 MT1MQ8N339 61 aa11.62□□□□□ -0.55
CSNK1E-204ENST00000403904 PRAC1Q96KF2 57 aa11.56□□□□□ -0.56
CSNK1E-204ENST00000403904 KRTAP20-1Q3LI63 56 aa11.54□□□□□ -0.56
CSNK1E-204ENST00000403904 KRTAP2-3P0C7H8 128 aa11.49□□□□□ -0.57
CSNK1E-204ENST00000403904 KRTAP2-4Q9BYR9 128 aa11.49□□□□□ -0.57
CSNK1E-204ENST00000403904 DSTQ03001 7570 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-204ENST00000403904 KRTAP4-7Q9BYR0 210 aa11.44□□□□□ -0.58
CSNK1E-204ENST00000403904 LCE3BQ5TA77 95 aa11.41□□□□□ -0.58
CSNK1E-204ENST00000403904 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
CSNK1E-204ENST00000403904 KRTAP4-3Q9BYR4 195 aa11.37□□□□□ -0.59
CSNK1E-204ENST00000403904 KRTAP19-4Q3LI73 84 aa11.36□□□□□ -0.59
CSNK1E-204ENST00000403904 LCE3CQ5T5A8 94 aa11.25□□□□□ -0.61
CSNK1E-204ENST00000403904 KRTAP2-2Q9BYT5 123 aa11.19□□□□□ -0.62
CSNK1E-204ENST00000403904 KRTAP2-1Q9BYU5 128 aa11.19□□□□□ -0.62
CSNK1E-204ENST00000403904 SVIPQ8NHG7 77 aa10.83□□□□□ -0.68
CSNK1E-204ENST00000403904 LOC100996750A0A140TA64 210 aa10.78□□□□□ -0.68
CSNK1E-204ENST00000403904 KRTAP9-6A8MVA2 160 aa10.64□□□□□ -0.71
CSNK1E-204ENST00000403904 KRTAP5-5Q701N2 237 aaPredicted RBP10.54□□□□□ -0.72
CSNK1E-204ENST00000403904 KRTAP5-4Q6L8H1 288 aa10.47□□□□□ -0.73
CSNK1E-204ENST00000403904 LCE4AQ5TA78 99 aa10.45□□□□□ -0.74
CSNK1E-204ENST00000403904 KRTAP4-9Q9BYQ8 210 aa10.4□□□□□ -0.74
CSNK1E-204ENST00000403904 SPRR5A0A1B0GTR4 108 aa10.31□□□□□ -0.76
CSNK1E-204ENST00000403904 MT4P47944 62 aa10.29□□□□□ -0.76
CSNK1E-204ENST00000403904 LCE1DQ5T752 114 aa10.25□□□□□ -0.77
CSNK1E-204ENST00000403904 HMCN1Q96RW7 5635 aa10.13□□□□□ -0.79
CSNK1E-204ENST00000403904 MT1AP04731 61 aa10.11□□□□□ -0.79
CSNK1E-204ENST00000403904 KRTAP4-6Q9BYQ5 205 aa10.11□□□□□ -0.79
CSNK1E-204ENST00000403904 SYNE1Q8NF91 8797 aaKnown RBP10.1□□□□□ -0.79
CSNK1E-204ENST00000403904 KRTAP6-1Q3LI64 71 aa10.04□□□□□ -0.8
CSNK1E-204ENST00000403904 KRTAP12-4P60329 112 aa10.01□□□□□ -0.81
CSNK1E-204ENST00000403904 KRTAP20-2Q3LI61 65 aa9.83□□□□□ -0.84
CSNK1E-204ENST00000403904 KRTAP9-4Q9BYQ2 154 aa9.68□□□□□ -0.86
CSNK1E-204ENST00000403904 LUZP6Q538Z0 58 aa9.54□□□□□ -0.88
CSNK1E-204ENST00000403904 KRTAP5-3Q6L8H2 238 aa9.5□□□□□ -0.89
CSNK1E-204ENST00000403904 KRTAP6-2Q3LI66 62 aa9.4□□□□□ -0.9
CSNK1E-204ENST00000403904 AHNAK2Q8IVF2 5795 aa9.37□□□□□ -0.91
CSNK1E-204ENST00000403904 KRTAP5-2Q701N4 177 aa9.34□□□□□ -0.91
CSNK1E-204ENST00000403904 MT3P25713 68 aa9.2□□□□□ -0.94
CSNK1E-204ENST00000403904 GPR98Q8WXG9 6306 aa9.15□□□□□ -0.94
CSNK1E-204ENST00000403904 KRTAP5-10Q6L8G5 202 aa8.98□□□□□ -0.97
CSNK1E-204ENST00000403904 OBSCNQ5VST9 7968 aa8.81□□□□□ -1
CSNK1E-204ENST00000403904 KRTAP4-11Q9BYQ6 195 aa8.73□□□□□ -1.01
CSNK1E-204ENST00000403904 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
CSNK1E-204ENST00000403904 KRTAP5-7Q6L8G8 165 aa8.47□□□□□ -1.05
CSNK1E-204ENST00000403904 KRTAP5-8O75690 187 aa8.42□□□□□ -1.06
CSNK1E-204ENST00000403904 LCE3DQ9BYE3 92 aa8.31□□□□□ -1.08
CSNK1E-204ENST00000403904 KRTAP5-1Q6L8H4 278 aa8.22□□□□□ -1.09
CSNK1E-204ENST00000403904 LCE1EQ5T753 118 aa8.18□□□□□ -1.1
CSNK1E-204ENST00000403904 MUC5ACP98088 5654 aa8.01□□□□□ -1.13
CSNK1E-204ENST00000403904 LCE3EQ5T5B0 92 aa7.97□□□□□ -1.13
CSNK1E-204ENST00000403904 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
CSNK1E-204ENST00000403904 LCE1BQ5T7P3 118 aa7.71□□□□□ -1.18
CSNK1E-204ENST00000403904 KRTAP4-2Q9BYR5 136 aa7.68□□□□□ -1.18
CSNK1E-204ENST00000403904 LCE1CQ5T751 118 aa7.62□□□□□ -1.19
CSNK1E-204ENST00000403904 MUC5BQ9HC84 5762 aaPredicted RBP7.58□□□□□ -1.2
CSNK1E-204ENST00000403904 AHNAKQ09666 5890 aaKnown RBP7.37□□□□□ -1.23
CSNK1E-204ENST00000403904 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
CSNK1E-204ENST00000403904 INE1O15225 51 aa7.09□□□□□ -1.27
CSNK1E-204ENST00000403904 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.03□□□□□ -1.28
CSNK1E-204ENST00000403904 KRTAP5-11Q6L8G4 156 aa6.8□□□□□ -1.32
CSNK1E-204ENST00000403904 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.34
CSNK1E-204ENST00000403904 KRTAP21-2Q3LI59 83 aa6.59□□□□□ -1.35
CSNK1E-204ENST00000403904 PRM1P04553 51 aa6.57□□□□□ -1.36
CSNK1E-204ENST00000403904 LCE1FQ5T754 118 aa6.35□□□□□ -1.39
CSNK1E-204ENST00000403904 H3BS24 57 aa6.01□□□□□ -1.45
CSNK1E-204ENST00000403904 KRTAP4-4Q9BYR3 166 aa5.94□□□□□ -1.46
CSNK1E-204ENST00000403904 PHGR1C9JFL3 82 aa5.85□□□□□ -1.47
CSNK1E-204ENST00000403904 MUC19Q7Z5P9 8384 aa5.34□□□□□ -1.55
CSNK1E-204ENST00000403904 KRTAP21-1Q3LI58 79 aa3.89□□□□□ -1.79
CSNK1E-204ENST00000403904 MUC16Q8WXI7 14507 aa3.71□□□□□ -1.82
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms