RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 MUC12Q9UKN1 5478 aa8.38□□□□□ -1.07
TRIOBP-203ENST00000403663 MT1EP04732 61 aa8.33□□□□□ -1.08
TRIOBP-203ENST00000403663 SPRR2FQ96RM1 72 aa8.32□□□□□ -1.08
TRIOBP-203ENST00000403663 KRTAP9-6A8MVA2 160 aa8.3□□□□□ -1.08
TRIOBP-203ENST00000403663 KRTAP5-9P26371 169 aa8.23□□□□□ -1.09
TRIOBP-203ENST00000403663 KRTAP2-3P0C7H8 128 aa8.18□□□□□ -1.1
TRIOBP-203ENST00000403663 KRTAP2-4Q9BYR9 128 aa8.18□□□□□ -1.1
TRIOBP-203ENST00000403663 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
TRIOBP-203ENST00000403663 KRTAP6-3Q3LI67 103 aa8.14□□□□□ -1.11
TRIOBP-203ENST00000403663 MT1LQ93083 61 aa8.14□□□□□ -1.11
TRIOBP-203ENST00000403663 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
TRIOBP-203ENST00000403663 KRTAP9-7A8MTY7 169 aa8.04□□□□□ -1.12
TRIOBP-203ENST00000403663 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
TRIOBP-203ENST00000403663 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
TRIOBP-203ENST00000403663 LCE1AQ5T7P2 110 aa7.97□□□□□ -1.13
TRIOBP-203ENST00000403663 SPRR2EP22531 72 aa7.92□□□□□ -1.14
TRIOBP-203ENST00000403663 SPRR2BP35325 72 aa7.92□□□□□ -1.14
TRIOBP-203ENST00000403663 SPRR2AP35326 72 aa7.92□□□□□ -1.14
TRIOBP-203ENST00000403663 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
TRIOBP-203ENST00000403663 MT1GP13640 62 aa7.89□□□□□ -1.15
TRIOBP-203ENST00000403663 MT1MQ8N339 61 aa7.86□□□□□ -1.15
TRIOBP-203ENST00000403663 KRTAP4-3Q9BYR4 195 aa7.82□□□□□ -1.16
TRIOBP-203ENST00000403663 KRTAP19-4Q3LI73 84 aa7.81□□□□□ -1.16
TRIOBP-203ENST00000403663 DSTQ03001 7570 aaKnown RBP7.73□□□□□ -1.17
TRIOBP-203ENST00000403663 NEBP20929 6669 aa7.69□□□□□ -1.18
TRIOBP-203ENST00000403663 SPRR2DP22532 72 aa7.62□□□□□ -1.19
TRIOBP-203ENST00000403663 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
TRIOBP-203ENST00000403663 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
TRIOBP-203ENST00000403663 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
TRIOBP-203ENST00000403663 KRTAP5-5Q701N2 237 aaPredicted RBP7.1□□□□□ -1.27
TRIOBP-203ENST00000403663 KRTAP20-1Q3LI63 56 aa7.09□□□□□ -1.28
TRIOBP-203ENST00000403663 KRTAP2-2Q9BYT5 123 aa6.98□□□□□ -1.29
TRIOBP-203ENST00000403663 KRTAP6-1Q3LI64 71 aa6.9□□□□□ -1.31
TRIOBP-203ENST00000403663 MT1AP04731 61 aa6.87□□□□□ -1.31
TRIOBP-203ENST00000403663 KRTAP4-9Q9BYQ8 210 aa6.86□□□□□ -1.31
TRIOBP-203ENST00000403663 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
TRIOBP-203ENST00000403663 SYNE1Q8NF91 8797 aaKnown RBP6.8□□□□□ -1.32
TRIOBP-203ENST00000403663 MT4P47944 62 aa6.68□□□□□ -1.34
TRIOBP-203ENST00000403663 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
TRIOBP-203ENST00000403663 LCE3DQ9BYE3 92 aa6.64□□□□□ -1.35
TRIOBP-203ENST00000403663 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
TRIOBP-203ENST00000403663 LCE3EQ5T5B0 92 aa6.6□□□□□ -1.35
TRIOBP-203ENST00000403663 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
TRIOBP-203ENST00000403663 PRM1P04553 51 aa6.56□□□□□ -1.36
TRIOBP-203ENST00000403663 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
TRIOBP-203ENST00000403663 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
TRIOBP-203ENST00000403663 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
TRIOBP-203ENST00000403663 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
TRIOBP-203ENST00000403663 MT3P25713 68 aa6.2□□□□□ -1.42
TRIOBP-203ENST00000403663 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
TRIOBP-203ENST00000403663 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
TRIOBP-203ENST00000403663 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
TRIOBP-203ENST00000403663 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
TRIOBP-203ENST00000403663 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
TRIOBP-203ENST00000403663 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
TRIOBP-203ENST00000403663 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
TRIOBP-203ENST00000403663 LCE1EQ5T753 118 aa5.41□□□□□ -1.54
TRIOBP-203ENST00000403663 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
TRIOBP-203ENST00000403663 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
TRIOBP-203ENST00000403663 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
TRIOBP-203ENST00000403663 LCE1BQ5T7P3 118 aa5.19□□□□□ -1.58
TRIOBP-203ENST00000403663 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
TRIOBP-203ENST00000403663 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
TRIOBP-203ENST00000403663 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
TRIOBP-203ENST00000403663 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
TRIOBP-203ENST00000403663 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
TRIOBP-203ENST00000403663 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
TRIOBP-203ENST00000403663 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
TRIOBP-203ENST00000403663 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
TRIOBP-203ENST00000403663 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.7
TRIOBP-203ENST00000403663 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
TRIOBP-203ENST00000403663 KRTAP21-1Q3LI58 79 aa4.2□□□□□ -1.74
TRIOBP-203ENST00000403663 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
TRIOBP-203ENST00000403663 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TRIOBP-203ENST00000403663 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
TRIOBP-203ENST00000403663 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
TRIOBP-203ENST00000403663 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms