RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 KRTAP12-3P60328 96 aa4.96□□□□□ -1.61
NDEL1-203ENST00000402554 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
NDEL1-203ENST00000402554 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
NDEL1-203ENST00000402554 SPRR2EP22531 72 aa4.88□□□□□ -1.63
NDEL1-203ENST00000402554 SPRR2BP35325 72 aa4.88□□□□□ -1.63
NDEL1-203ENST00000402554 SPRR2AP35326 72 aa4.88□□□□□ -1.63
NDEL1-203ENST00000402554 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
NDEL1-203ENST00000402554 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
NDEL1-203ENST00000402554 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
NDEL1-203ENST00000402554 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
NDEL1-203ENST00000402554 SPRR2DP22532 72 aa4.72□□□□□ -1.65
NDEL1-203ENST00000402554 MT1EP04732 61 aa4.7□□□□□ -1.66
NDEL1-203ENST00000402554 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
NDEL1-203ENST00000402554 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
NDEL1-203ENST00000402554 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
NDEL1-203ENST00000402554 MT1LQ93083 61 aa4.62□□□□□ -1.67
NDEL1-203ENST00000402554 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
NDEL1-203ENST00000402554 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
NDEL1-203ENST00000402554 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
NDEL1-203ENST00000402554 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
NDEL1-203ENST00000402554 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
NDEL1-203ENST00000402554 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
NDEL1-203ENST00000402554 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
NDEL1-203ENST00000402554 MT1GP13640 62 aa4.46□□□□□ -1.7
NDEL1-203ENST00000402554 MT1MQ8N339 61 aa4.43□□□□□ -1.7
NDEL1-203ENST00000402554 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
NDEL1-203ENST00000402554 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
NDEL1-203ENST00000402554 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
NDEL1-203ENST00000402554 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
NDEL1-203ENST00000402554 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
NDEL1-203ENST00000402554 INE1O15225 51 aa4.2□□□□□ -1.74
NDEL1-203ENST00000402554 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
NDEL1-203ENST00000402554 MT4P47944 62 aa4.14□□□□□ -1.75
NDEL1-203ENST00000402554 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
NDEL1-203ENST00000402554 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
NDEL1-203ENST00000402554 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
NDEL1-203ENST00000402554 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
NDEL1-203ENST00000402554 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
NDEL1-203ENST00000402554 MT1AP04731 61 aa3.92□□□□□ -1.78
NDEL1-203ENST00000402554 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
NDEL1-203ENST00000402554 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
NDEL1-203ENST00000402554 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
NDEL1-203ENST00000402554 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
NDEL1-203ENST00000402554 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
NDEL1-203ENST00000402554 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
NDEL1-203ENST00000402554 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
NDEL1-203ENST00000402554 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
NDEL1-203ENST00000402554 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
NDEL1-203ENST00000402554 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
NDEL1-203ENST00000402554 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
NDEL1-203ENST00000402554 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
NDEL1-203ENST00000402554 MT3P25713 68 aa3.56□□□□□ -1.84
NDEL1-203ENST00000402554 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
NDEL1-203ENST00000402554 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
NDEL1-203ENST00000402554 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
NDEL1-203ENST00000402554 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
NDEL1-203ENST00000402554 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NDEL1-203ENST00000402554 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
NDEL1-203ENST00000402554 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
NDEL1-203ENST00000402554 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
NDEL1-203ENST00000402554 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
NDEL1-203ENST00000402554 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
NDEL1-203ENST00000402554 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
NDEL1-203ENST00000402554 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
NDEL1-203ENST00000402554 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
NDEL1-203ENST00000402554 PRM1P04553 51 aa3.05□□□□□ -1.92
NDEL1-203ENST00000402554 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
NDEL1-203ENST00000402554 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
NDEL1-203ENST00000402554 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
NDEL1-203ENST00000402554 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
NDEL1-203ENST00000402554 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
NDEL1-203ENST00000402554 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
NDEL1-203ENST00000402554 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
NDEL1-203ENST00000402554 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
NDEL1-203ENST00000402554 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
NDEL1-203ENST00000402554 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
NDEL1-203ENST00000402554 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 145.6 ms