RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
RCC1-204ENST00000398958 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
RCC1-204ENST00000398958 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
RCC1-204ENST00000398958 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
RCC1-204ENST00000398958 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
RCC1-204ENST00000398958 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
RCC1-204ENST00000398958 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
RCC1-204ENST00000398958 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
RCC1-204ENST00000398958 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
RCC1-204ENST00000398958 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
RCC1-204ENST00000398958 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
RCC1-204ENST00000398958 MT1EP04732 61 aa3.9□□□□□ -1.79
RCC1-204ENST00000398958 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
RCC1-204ENST00000398958 MT1LQ93083 61 aa3.88□□□□□ -1.79
RCC1-204ENST00000398958 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
RCC1-204ENST00000398958 MT1GP13640 62 aa3.79□□□□□ -1.8
RCC1-204ENST00000398958 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
RCC1-204ENST00000398958 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
RCC1-204ENST00000398958 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
RCC1-204ENST00000398958 MT1MQ8N339 61 aa3.67□□□□□ -1.82
RCC1-204ENST00000398958 SPRR2EP22531 72 aa3.63□□□□□ -1.83
RCC1-204ENST00000398958 SPRR2BP35325 72 aa3.63□□□□□ -1.83
RCC1-204ENST00000398958 SPRR2AP35326 72 aa3.63□□□□□ -1.83
RCC1-204ENST00000398958 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
RCC1-204ENST00000398958 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
RCC1-204ENST00000398958 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
RCC1-204ENST00000398958 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
RCC1-204ENST00000398958 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
RCC1-204ENST00000398958 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
RCC1-204ENST00000398958 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
RCC1-204ENST00000398958 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
RCC1-204ENST00000398958 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
RCC1-204ENST00000398958 SPRR2DP22532 72 aa3.45□□□□□ -1.86
RCC1-204ENST00000398958 NEBP20929 6669 aa3.44□□□□□ -1.86
RCC1-204ENST00000398958 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.86
RCC1-204ENST00000398958 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
RCC1-204ENST00000398958 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
RCC1-204ENST00000398958 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
RCC1-204ENST00000398958 MT1AP04731 61 aa3.23□□□□□ -1.89
RCC1-204ENST00000398958 MT4P47944 62 aa3.23□□□□□ -1.89
RCC1-204ENST00000398958 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.89
RCC1-204ENST00000398958 PRM1P04553 51 aa3.2□□□□□ -1.9
RCC1-204ENST00000398958 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
RCC1-204ENST00000398958 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
RCC1-204ENST00000398958 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
RCC1-204ENST00000398958 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
RCC1-204ENST00000398958 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
RCC1-204ENST00000398958 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
RCC1-204ENST00000398958 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
RCC1-204ENST00000398958 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
RCC1-204ENST00000398958 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
RCC1-204ENST00000398958 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
RCC1-204ENST00000398958 MT3P25713 68 aa2.92□□□□□ -1.94
RCC1-204ENST00000398958 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
RCC1-204ENST00000398958 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
RCC1-204ENST00000398958 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
RCC1-204ENST00000398958 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
RCC1-204ENST00000398958 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
RCC1-204ENST00000398958 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
RCC1-204ENST00000398958 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
RCC1-204ENST00000398958 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
RCC1-204ENST00000398958 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
RCC1-204ENST00000398958 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
RCC1-204ENST00000398958 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
RCC1-204ENST00000398958 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
RCC1-204ENST00000398958 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
RCC1-204ENST00000398958 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
RCC1-204ENST00000398958 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
RCC1-204ENST00000398958 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
RCC1-204ENST00000398958 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
RCC1-204ENST00000398958 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
RCC1-204ENST00000398958 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
RCC1-204ENST00000398958 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
RCC1-204ENST00000398958 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
RCC1-204ENST00000398958 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
RCC1-204ENST00000398958 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
RCC1-204ENST00000398958 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms