RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 MT1FP04733 61 aa3.9□□□□□ -1.78
PTCHD4-202ENST00000398738 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
PTCHD4-202ENST00000398738 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
PTCHD4-202ENST00000398738 MT2AP02795 61 aa3.85□□□□□ -1.79
PTCHD4-202ENST00000398738 MT1HP80294 61 aa3.85□□□□□ -1.79
PTCHD4-202ENST00000398738 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
PTCHD4-202ENST00000398738 INE1O15225 51 aa3.83□□□□□ -1.8
PTCHD4-202ENST00000398738 KMT2DO14686 5537 aa3.82□□□□□ -1.8
PTCHD4-202ENST00000398738 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
PTCHD4-202ENST00000398738 MT1XP80297 61 aa3.8□□□□□ -1.8
PTCHD4-202ENST00000398738 USH2AO75445 5202 aa3.78□□□□□ -1.8
PTCHD4-202ENST00000398738 MT1BP07438 61 aa3.76□□□□□ -1.81
PTCHD4-202ENST00000398738 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
PTCHD4-202ENST00000398738 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
PTCHD4-202ENST00000398738 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
PTCHD4-202ENST00000398738 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
PTCHD4-202ENST00000398738 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
PTCHD4-202ENST00000398738 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
PTCHD4-202ENST00000398738 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
PTCHD4-202ENST00000398738 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PTCHD4-202ENST00000398738 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
PTCHD4-202ENST00000398738 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.86
PTCHD4-202ENST00000398738 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
PTCHD4-202ENST00000398738 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
PTCHD4-202ENST00000398738 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
PTCHD4-202ENST00000398738 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
PTCHD4-202ENST00000398738 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
PTCHD4-202ENST00000398738 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
PTCHD4-202ENST00000398738 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
PTCHD4-202ENST00000398738 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
PTCHD4-202ENST00000398738 MT1LQ93083 61 aa3.29□□□□□ -1.88
PTCHD4-202ENST00000398738 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
PTCHD4-202ENST00000398738 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
PTCHD4-202ENST00000398738 MT1EP04732 61 aa3.25□□□□□ -1.89
PTCHD4-202ENST00000398738 MT1GP13640 62 aa3.25□□□□□ -1.89
PTCHD4-202ENST00000398738 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
PTCHD4-202ENST00000398738 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
PTCHD4-202ENST00000398738 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
PTCHD4-202ENST00000398738 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
PTCHD4-202ENST00000398738 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
PTCHD4-202ENST00000398738 MT1MQ8N339 61 aa3.04□□□□□ -1.92
PTCHD4-202ENST00000398738 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
PTCHD4-202ENST00000398738 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
PTCHD4-202ENST00000398738 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
PTCHD4-202ENST00000398738 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
PTCHD4-202ENST00000398738 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
PTCHD4-202ENST00000398738 NEBP20929 6669 aa2.92□□□□□ -1.94
PTCHD4-202ENST00000398738 PRM1P04553 51 aa2.89□□□□□ -1.95
PTCHD4-202ENST00000398738 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
PTCHD4-202ENST00000398738 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
PTCHD4-202ENST00000398738 SPRR2EP22531 72 aa2.81□□□□□ -1.96
PTCHD4-202ENST00000398738 SPRR2BP35325 72 aa2.81□□□□□ -1.96
PTCHD4-202ENST00000398738 SPRR2AP35326 72 aa2.81□□□□□ -1.96
PTCHD4-202ENST00000398738 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
PTCHD4-202ENST00000398738 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
PTCHD4-202ENST00000398738 MT1AP04731 61 aa2.74□□□□□ -1.97
PTCHD4-202ENST00000398738 SPRR2DP22532 72 aa2.72□□□□□ -1.97
PTCHD4-202ENST00000398738 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PTCHD4-202ENST00000398738 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
PTCHD4-202ENST00000398738 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
PTCHD4-202ENST00000398738 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PTCHD4-202ENST00000398738 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
PTCHD4-202ENST00000398738 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
PTCHD4-202ENST00000398738 MT4P47944 62 aa2.32□□□□□ -2.04
PTCHD4-202ENST00000398738 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
PTCHD4-202ENST00000398738 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
PTCHD4-202ENST00000398738 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
PTCHD4-202ENST00000398738 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
PTCHD4-202ENST00000398738 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
PTCHD4-202ENST00000398738 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
PTCHD4-202ENST00000398738 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
PTCHD4-202ENST00000398738 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
PTCHD4-202ENST00000398738 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
PTCHD4-202ENST00000398738 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
PTCHD4-202ENST00000398738 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
PTCHD4-202ENST00000398738 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PTCHD4-202ENST00000398738 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
PTCHD4-202ENST00000398738 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 59.6 ms