RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.78
SFTPA1-201ENST00000398636 NEBP20929 6669 aa3.89□□□□□ -1.79
SFTPA1-201ENST00000398636 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
SFTPA1-201ENST00000398636 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
SFTPA1-201ENST00000398636 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
SFTPA1-201ENST00000398636 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SFTPA1-201ENST00000398636 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
SFTPA1-201ENST00000398636 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
SFTPA1-201ENST00000398636 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
SFTPA1-201ENST00000398636 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
SFTPA1-201ENST00000398636 MT1EP04732 61 aa3.76□□□□□ -1.81
SFTPA1-201ENST00000398636 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
SFTPA1-201ENST00000398636 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
SFTPA1-201ENST00000398636 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
SFTPA1-201ENST00000398636 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SFTPA1-201ENST00000398636 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SFTPA1-201ENST00000398636 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SFTPA1-201ENST00000398636 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SFTPA1-201ENST00000398636 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
SFTPA1-201ENST00000398636 MT1LQ93083 61 aa3.64□□□□□ -1.83
SFTPA1-201ENST00000398636 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SFTPA1-201ENST00000398636 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
SFTPA1-201ENST00000398636 MT1GP13640 62 aa3.59□□□□□ -1.83
SFTPA1-201ENST00000398636 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
SFTPA1-201ENST00000398636 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
SFTPA1-201ENST00000398636 SPRR2DP22532 72 aa3.56□□□□□ -1.84
SFTPA1-201ENST00000398636 MT1MQ8N339 61 aa3.55□□□□□ -1.84
SFTPA1-201ENST00000398636 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
SFTPA1-201ENST00000398636 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
SFTPA1-201ENST00000398636 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
SFTPA1-201ENST00000398636 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
SFTPA1-201ENST00000398636 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
SFTPA1-201ENST00000398636 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
SFTPA1-201ENST00000398636 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
SFTPA1-201ENST00000398636 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
SFTPA1-201ENST00000398636 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
SFTPA1-201ENST00000398636 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SFTPA1-201ENST00000398636 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
SFTPA1-201ENST00000398636 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
SFTPA1-201ENST00000398636 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
SFTPA1-201ENST00000398636 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
SFTPA1-201ENST00000398636 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
SFTPA1-201ENST00000398636 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
SFTPA1-201ENST00000398636 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
SFTPA1-201ENST00000398636 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
SFTPA1-201ENST00000398636 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SFTPA1-201ENST00000398636 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
SFTPA1-201ENST00000398636 MT4P47944 62 aa3.1□□□□□ -1.91
SFTPA1-201ENST00000398636 MT1AP04731 61 aa3.09□□□□□ -1.91
SFTPA1-201ENST00000398636 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
SFTPA1-201ENST00000398636 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SFTPA1-201ENST00000398636 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
SFTPA1-201ENST00000398636 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
SFTPA1-201ENST00000398636 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SFTPA1-201ENST00000398636 PRM1P04553 51 aa2.89□□□□□ -1.95
SFTPA1-201ENST00000398636 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
SFTPA1-201ENST00000398636 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SFTPA1-201ENST00000398636 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
SFTPA1-201ENST00000398636 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
SFTPA1-201ENST00000398636 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
SFTPA1-201ENST00000398636 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
SFTPA1-201ENST00000398636 MT3P25713 68 aa2.79□□□□□ -1.96
SFTPA1-201ENST00000398636 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
SFTPA1-201ENST00000398636 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
SFTPA1-201ENST00000398636 LCE1EQ5T753 118 aa2.56□□□□□ -2
SFTPA1-201ENST00000398636 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
SFTPA1-201ENST00000398636 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
SFTPA1-201ENST00000398636 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
SFTPA1-201ENST00000398636 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
SFTPA1-201ENST00000398636 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
SFTPA1-201ENST00000398636 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
SFTPA1-201ENST00000398636 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SFTPA1-201ENST00000398636 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
SFTPA1-201ENST00000398636 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
SFTPA1-201ENST00000398636 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SFTPA1-201ENST00000398636 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
SFTPA1-201ENST00000398636 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 36.1 ms