RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 DNAH17Q9UFH2 4485 aa0.62□□□□□ -2.31
CEP290-202ENST00000397838 MT1EP04732 61 aa0.62□□□□□ -2.31
CEP290-202ENST00000397838 SPRR2GQ9BYE4 73 aa0.62□□□□□ -2.31
CEP290-202ENST00000397838 DNAH9Q9NYC9 4486 aa0.61□□□□□ -2.31
CEP290-202ENST00000397838 MGAQ8IWI9 3026 aa0.61□□□□□ -2.31
CEP290-202ENST00000397838 LPAP08519 4548 aa0.6□□□□□ -2.31
CEP290-202ENST00000397838 CENPEQ02224 2701 aa0.59□□□□□ -2.31
CEP290-202ENST00000397838 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.32
CEP290-202ENST00000397838 COL12A1Q99715 3063 aa0.59□□□□□ -2.32
CEP290-202ENST00000397838 FAT1Q14517 4588 aa0.59□□□□□ -2.32
CEP290-202ENST00000397838 CFAP54Q96N23 3096 aa0.58□□□□□ -2.32
CEP290-202ENST00000397838 LAMA3Q16787 3333 aa0.58□□□□□ -2.32
CEP290-202ENST00000397838 MT1LQ93083 61 aa0.57□□□□□ -2.32
CEP290-202ENST00000397838 ZZEF1O43149 2961 aa0.57□□□□□ -2.32
CEP290-202ENST00000397838 SZT2Q5T011 3432 aa0.56□□□□□ -2.32
CEP290-202ENST00000397838 KRTAP19-8Q3LI54 63 aa0.56□□□□□ -2.32
CEP290-202ENST00000397838 MT1HP80294 61 aa0.56□□□□□ -2.32
CEP290-202ENST00000397838 APOBP04114 4563 aaKnown RBP0.55□□□□□ -2.32
CEP290-202ENST00000397838 TRRAPQ9Y4A5 3859 aa0.54□□□□□ -2.32
CEP290-202ENST00000397838 MT4P47944 62 aa0.54□□□□□ -2.32
CEP290-202ENST00000397838 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.32
CEP290-202ENST00000397838 MKI67P46013 3256 aaKnown RBP0.53□□□□□ -2.32
CEP290-202ENST00000397838 TACC2O95359 2948 aa0.53□□□□□ -2.32
CEP290-202ENST00000397838 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.33
CEP290-202ENST00000397838 FRYLO94915 3013 aa0.51□□□□□ -2.33
CEP290-202ENST00000397838 USP34Q70CQ2 3546 aa0.5□□□□□ -2.33
CEP290-202ENST00000397838 MUC17Q685J3 4493 aa0.5□□□□□ -2.33
CEP290-202ENST00000397838 SPEGQ15772 3267 aa0.49□□□□□ -2.33
CEP290-202ENST00000397838 LAMA5O15230 3695 aa0.49□□□□□ -2.33
CEP290-202ENST00000397838 MT1XP80297 61 aa0.48□□□□□ -2.33
CEP290-202ENST00000397838 DCHS2Q6V1P9 2916 aa0.47□□□□□ -2.33
CEP290-202ENST00000397838 PCNTO95613 3336 aa0.47□□□□□ -2.33
CEP290-202ENST00000397838 KRTAP19-2Q3LHN2 52 aa0.47□□□□□ -2.33
CEP290-202ENST00000397838 FRYQ5TBA9 3013 aa0.47□□□□□ -2.33
CEP290-202ENST00000397838 PRUNE2Q8WUY3 3088 aa0.46□□□□□ -2.34
CEP290-202ENST00000397838 TRIOO75962 3097 aa0.45□□□□□ -2.34
CEP290-202ENST00000397838 LAMA1P25391 3075 aa0.45□□□□□ -2.34
CEP290-202ENST00000397838 DMDP11532 3685 aa0.44□□□□□ -2.34
CEP290-202ENST00000397838 MT1MQ8N339 61 aa0.44□□□□□ -2.34
CEP290-202ENST00000397838 DMXL1Q9Y485 3027 aa0.43□□□□□ -2.34
CEP290-202ENST00000397838 MT2AP02795 61 aa0.43□□□□□ -2.34
CEP290-202ENST00000397838 EP400Q96L91 3159 aa0.43□□□□□ -2.34
CEP290-202ENST00000397838 MT1GP13640 62 aa0.43□□□□□ -2.34
CEP290-202ENST00000397838 KRTAP19-7Q3SYF9 63 aa0.43□□□□□ -2.34
CEP290-202ENST00000397838 MT1BP07438 61 aa0.42□□□□□ -2.34
CEP290-202ENST00000397838 SPENQ96T58 3664 aaKnown RBP0.41□□□□□ -2.34
CEP290-202ENST00000397838 MT1HL1P0DM35 61 aa0.41□□□□□ -2.34
CEP290-202ENST00000397838 CSMD1Q96PZ7 3565 aa0.41□□□□□ -2.34
CEP290-202ENST00000397838 SMG1Q96Q15 3661 aaKnown RBP0.39□□□□□ -2.35
CEP290-202ENST00000397838 MT1FP04733 61 aa0.38□□□□□ -2.35
CEP290-202ENST00000397838 ADGRG4Q8IZF6 3080 aa0.38□□□□□ -2.35
CEP290-202ENST00000397838 SVEP1Q4LDE5 3571 aa0.38□□□□□ -2.35
CEP290-202ENST00000397838 VCANP13611 3396 aa0.38□□□□□ -2.35
CEP290-202ENST00000397838 DMXL2Q8TDJ6 3036 aa0.38□□□□□ -2.35
CEP290-202ENST00000397838 ATMQ13315 3056 aa0.37□□□□□ -2.35
CEP290-202ENST00000397838 FREM2Q5SZK8 3169 aa0.37□□□□□ -2.35
CEP290-202ENST00000397838 CUBNO60494 3623 aa0.36□□□□□ -2.35
CEP290-202ENST00000397838 HTTP42858 3142 aa0.35□□□□□ -2.35
CEP290-202ENST00000397838 UNC80Q8N2C7 3258 aa0.35□□□□□ -2.35
CEP290-202ENST00000397838 VPS13AQ96RL7 3174 aa0.34□□□□□ -2.35
CEP290-202ENST00000397838 KRTAP20-2Q3LI61 65 aa0.34□□□□□ -2.36
CEP290-202ENST00000397838 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
CEP290-202ENST00000397838 GOLGB1Q14789 3259 aaKnown RBP0.32□□□□□ -2.36
CEP290-202ENST00000397838 C5orf42Q9H799 3197 aa0.32□□□□□ -2.36
CEP290-202ENST00000397838 DCHS1Q96JQ0 3298 aa0.31□□□□□ -2.36
CEP290-202ENST00000397838 CSMD2Q7Z408 3487 aa0.3□□□□□ -2.36
CEP290-202ENST00000397838 UTRNP46939 3433 aa0.29□□□□□ -2.36
CEP290-202ENST00000397838 LOC400499M0QZD8 3231 aa0.27□□□□□ -2.37
CEP290-202ENST00000397838 CENPFP49454 3210 aa0.26□□□□□ -2.37
CEP290-202ENST00000397838 XIRP2A4UGR9 3374 aa0.25□□□□□ -2.37
CEP290-202ENST00000397838 DNAH14Q0VDD8 3507 aa0.21□□□□□ -2.38
CEP290-202ENST00000397838 BRCA2P51587 3418 aa0.21□□□□□ -2.38
CEP290-202ENST00000397838 WDFY3Q8IZQ1 3526 aa0.21□□□□□ -2.38
CEP290-202ENST00000397838 MYO15AQ9UKN7 3530 aa0.21□□□□□ -2.38
CEP290-202ENST00000397838 ASPMQ8IZT6 3477 aa0.18□□□□□ -2.38
CEP290-202ENST00000397838 MUC3AQ02505 3323 aa0.17□□□□□ -2.38
CEP290-202ENST00000397838 CDH23Q9H251 3354 aa0.03□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 414.5 ms