RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KRTAP2-3P0C7H8 128 aa8.64□□□□□ -1.03
TSPAN4-203ENST00000397397 KRTAP2-4Q9BYR9 128 aa8.64□□□□□ -1.03
TSPAN4-203ENST00000397397 KRTAP12-3P60328 96 aa8.61□□□□□ -1.03
TSPAN4-203ENST00000397397 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
TSPAN4-203ENST00000397397 SPRR2DP22532 72 aa8.54□□□□□ -1.04
TSPAN4-203ENST00000397397 KRTAP19-3Q7Z4W3 81 aa8.47□□□□□ -1.05
TSPAN4-203ENST00000397397 MT1LQ93083 61 aa8.44□□□□□ -1.06
TSPAN4-203ENST00000397397 LCE5AQ5TCM9 118 aa8.38□□□□□ -1.07
TSPAN4-203ENST00000397397 KRTAP2-2Q9BYT5 123 aa8.38□□□□□ -1.07
TSPAN4-203ENST00000397397 KRTAP2-1Q9BYU5 128 aa8.38□□□□□ -1.07
TSPAN4-203ENST00000397397 MT1GP13640 62 aa8.35□□□□□ -1.07
TSPAN4-203ENST00000397397 LCE3BQ5TA77 95 aa8.3□□□□□ -1.08
TSPAN4-203ENST00000397397 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
TSPAN4-203ENST00000397397 PRAC1Q96KF2 57 aa8.27□□□□□ -1.09
TSPAN4-203ENST00000397397 MT1MQ8N339 61 aa8.23□□□□□ -1.09
TSPAN4-203ENST00000397397 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
TSPAN4-203ENST00000397397 KRTAP19-4Q3LI73 84 aa8.11□□□□□ -1.11
TSPAN4-203ENST00000397397 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
TSPAN4-203ENST00000397397 DSTQ03001 7570 aaKnown RBP8.04□□□□□ -1.12
TSPAN4-203ENST00000397397 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
TSPAN4-203ENST00000397397 LCE3CQ5T5A8 94 aa7.99□□□□□ -1.13
TSPAN4-203ENST00000397397 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
TSPAN4-203ENST00000397397 GPR98Q8WXG9 6306 aa7.8□□□□□ -1.16
TSPAN4-203ENST00000397397 KRTAP4-9Q9BYQ8 210 aa7.73□□□□□ -1.17
TSPAN4-203ENST00000397397 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
TSPAN4-203ENST00000397397 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
TSPAN4-203ENST00000397397 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
TSPAN4-203ENST00000397397 KRTAP9-6A8MVA2 160 aa7.52□□□□□ -1.21
TSPAN4-203ENST00000397397 MT4P47944 62 aa7.48□□□□□ -1.21
TSPAN4-203ENST00000397397 KRTAP5-4Q6L8H1 288 aa7.45□□□□□ -1.22
TSPAN4-203ENST00000397397 KRTAP5-5Q701N2 237 aaPredicted RBP7.45□□□□□ -1.22
TSPAN4-203ENST00000397397 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
TSPAN4-203ENST00000397397 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
TSPAN4-203ENST00000397397 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
TSPAN4-203ENST00000397397 MT1AP04731 61 aa7.18□□□□□ -1.26
TSPAN4-203ENST00000397397 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
TSPAN4-203ENST00000397397 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
TSPAN4-203ENST00000397397 AHNAK2Q8IVF2 5795 aa7.07□□□□□ -1.28
TSPAN4-203ENST00000397397 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
TSPAN4-203ENST00000397397 KRTAP20-2Q3LI61 65 aa7.03□□□□□ -1.28
TSPAN4-203ENST00000397397 KRTAP5-10Q6L8G5 202 aa6.96□□□□□ -1.3
TSPAN4-203ENST00000397397 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
TSPAN4-203ENST00000397397 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
TSPAN4-203ENST00000397397 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
TSPAN4-203ENST00000397397 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
TSPAN4-203ENST00000397397 KRTAP6-2Q3LI66 62 aa6.66□□□□□ -1.34
TSPAN4-203ENST00000397397 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
TSPAN4-203ENST00000397397 MT3P25713 68 aa6.54□□□□□ -1.36
TSPAN4-203ENST00000397397 KRTAP4-11Q9BYQ6 195 aa6.38□□□□□ -1.39
TSPAN4-203ENST00000397397 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
TSPAN4-203ENST00000397397 KRTAP5-8O75690 187 aa6.18□□□□□ -1.42
TSPAN4-203ENST00000397397 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
TSPAN4-203ENST00000397397 AHNAKQ09666 5890 aaKnown RBP5.97□□□□□ -1.45
TSPAN4-203ENST00000397397 LCE3DQ9BYE3 92 aa5.91□□□□□ -1.46
TSPAN4-203ENST00000397397 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
TSPAN4-203ENST00000397397 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
TSPAN4-203ENST00000397397 MUC5BQ9HC84 5762 aaPredicted RBP5.85□□□□□ -1.47
TSPAN4-203ENST00000397397 LCE1EQ5T753 118 aa5.81□□□□□ -1.48
TSPAN4-203ENST00000397397 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
TSPAN4-203ENST00000397397 LCE3EQ5T5B0 92 aa5.68□□□□□ -1.5
TSPAN4-203ENST00000397397 H3BS24 57 aa5.49□□□□□ -1.53
TSPAN4-203ENST00000397397 LCE1BQ5T7P3 118 aa5.47□□□□□ -1.53
TSPAN4-203ENST00000397397 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
TSPAN4-203ENST00000397397 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
TSPAN4-203ENST00000397397 LCE1CQ5T751 118 aa5.39□□□□□ -1.55
TSPAN4-203ENST00000397397 INE1O15225 51 aa5.14□□□□□ -1.59
TSPAN4-203ENST00000397397 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.98□□□□□ -1.61
TSPAN4-203ENST00000397397 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
TSPAN4-203ENST00000397397 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
TSPAN4-203ENST00000397397 PRM1P04553 51 aa4.69□□□□□ -1.66
TSPAN4-203ENST00000397397 KRTAP21-2Q3LI59 83 aa4.66□□□□□ -1.66
TSPAN4-203ENST00000397397 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
TSPAN4-203ENST00000397397 KRTAP4-4Q9BYR3 166 aa4.2□□□□□ -1.74
TSPAN4-203ENST00000397397 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
TSPAN4-203ENST00000397397 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
TSPAN4-203ENST00000397397 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
TSPAN4-203ENST00000397397 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 77.4 ms