RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
LMCD1-202ENST00000397386 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
LMCD1-202ENST00000397386 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
LMCD1-202ENST00000397386 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
LMCD1-202ENST00000397386 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
LMCD1-202ENST00000397386 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
LMCD1-202ENST00000397386 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
LMCD1-202ENST00000397386 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
LMCD1-202ENST00000397386 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
LMCD1-202ENST00000397386 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
LMCD1-202ENST00000397386 MT1EP04732 61 aa4.63□□□□□ -1.67
LMCD1-202ENST00000397386 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
LMCD1-202ENST00000397386 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
LMCD1-202ENST00000397386 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
LMCD1-202ENST00000397386 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
LMCD1-202ENST00000397386 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
LMCD1-202ENST00000397386 MT1LQ93083 61 aa4.52□□□□□ -1.69
LMCD1-202ENST00000397386 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
LMCD1-202ENST00000397386 MT1GP13640 62 aa4.46□□□□□ -1.69
LMCD1-202ENST00000397386 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.69
LMCD1-202ENST00000397386 LCE4AQ5TA78 99 aa4.46□□□□□ -1.69
LMCD1-202ENST00000397386 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
LMCD1-202ENST00000397386 NEBP20929 6669 aa4.43□□□□□ -1.7
LMCD1-202ENST00000397386 SPRR2EP22531 72 aa4.43□□□□□ -1.7
LMCD1-202ENST00000397386 SPRR2BP35325 72 aa4.43□□□□□ -1.7
LMCD1-202ENST00000397386 SPRR2AP35326 72 aa4.43□□□□□ -1.7
LMCD1-202ENST00000397386 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
LMCD1-202ENST00000397386 MT1MQ8N339 61 aa4.37□□□□□ -1.71
LMCD1-202ENST00000397386 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
LMCD1-202ENST00000397386 SPRR2DP22532 72 aa4.28□□□□□ -1.72
LMCD1-202ENST00000397386 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
LMCD1-202ENST00000397386 INE1O15225 51 aa4.22□□□□□ -1.73
LMCD1-202ENST00000397386 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
LMCD1-202ENST00000397386 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
LMCD1-202ENST00000397386 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
LMCD1-202ENST00000397386 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
LMCD1-202ENST00000397386 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
LMCD1-202ENST00000397386 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
LMCD1-202ENST00000397386 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
LMCD1-202ENST00000397386 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
LMCD1-202ENST00000397386 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
LMCD1-202ENST00000397386 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
LMCD1-202ENST00000397386 MT1AP04731 61 aa3.86□□□□□ -1.79
LMCD1-202ENST00000397386 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
LMCD1-202ENST00000397386 MT4P47944 62 aa3.74□□□□□ -1.81
LMCD1-202ENST00000397386 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
LMCD1-202ENST00000397386 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
LMCD1-202ENST00000397386 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
LMCD1-202ENST00000397386 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
LMCD1-202ENST00000397386 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
LMCD1-202ENST00000397386 MT3P25713 68 aa3.55□□□□□ -1.84
LMCD1-202ENST00000397386 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
LMCD1-202ENST00000397386 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
LMCD1-202ENST00000397386 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
LMCD1-202ENST00000397386 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
LMCD1-202ENST00000397386 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
LMCD1-202ENST00000397386 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
LMCD1-202ENST00000397386 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
LMCD1-202ENST00000397386 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
LMCD1-202ENST00000397386 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LMCD1-202ENST00000397386 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
LMCD1-202ENST00000397386 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
LMCD1-202ENST00000397386 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
LMCD1-202ENST00000397386 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
LMCD1-202ENST00000397386 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
LMCD1-202ENST00000397386 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
LMCD1-202ENST00000397386 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
LMCD1-202ENST00000397386 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
LMCD1-202ENST00000397386 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
LMCD1-202ENST00000397386 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
LMCD1-202ENST00000397386 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
LMCD1-202ENST00000397386 PRM1P04553 51 aa2.67□□□□□ -1.98
LMCD1-202ENST00000397386 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
LMCD1-202ENST00000397386 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
LMCD1-202ENST00000397386 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
LMCD1-202ENST00000397386 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
LMCD1-202ENST00000397386 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 131.7 ms