RNA–Protein interactions for RNA: ENST00000397015.6

PPARG-207, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 1,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-207ENST00000397015 LCE3AQ5TA76 89 aa3.53□□□□□ -1.85
PPARG-207ENST00000397015 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
PPARG-207ENST00000397015 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
PPARG-207ENST00000397015 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
PPARG-207ENST00000397015 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
PPARG-207ENST00000397015 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
PPARG-207ENST00000397015 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
PPARG-207ENST00000397015 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
PPARG-207ENST00000397015 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
PPARG-207ENST00000397015 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
PPARG-207ENST00000397015 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
PPARG-207ENST00000397015 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
PPARG-207ENST00000397015 KMT2DO14686 5537 aa3.32□□□□□ -1.88
PPARG-207ENST00000397015 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
PPARG-207ENST00000397015 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
PPARG-207ENST00000397015 NEBP20929 6669 aa3.3□□□□□ -1.88
PPARG-207ENST00000397015 MT1EP04732 61 aa3.27□□□□□ -1.89
PPARG-207ENST00000397015 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
PPARG-207ENST00000397015 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
PPARG-207ENST00000397015 MT1LQ93083 61 aa3.2□□□□□ -1.9
PPARG-207ENST00000397015 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
PPARG-207ENST00000397015 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
PPARG-207ENST00000397015 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
PPARG-207ENST00000397015 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
PPARG-207ENST00000397015 MT1GP13640 62 aa3.16□□□□□ -1.9
PPARG-207ENST00000397015 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
PPARG-207ENST00000397015 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
PPARG-207ENST00000397015 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
PPARG-207ENST00000397015 MT1MQ8N339 61 aa3.07□□□□□ -1.92
PPARG-207ENST00000397015 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
PPARG-207ENST00000397015 SPRR2EP22531 72 aa3.04□□□□□ -1.92
PPARG-207ENST00000397015 SPRR2BP35325 72 aa3.04□□□□□ -1.92
PPARG-207ENST00000397015 SPRR2AP35326 72 aa3.04□□□□□ -1.92
PPARG-207ENST00000397015 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
PPARG-207ENST00000397015 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
PPARG-207ENST00000397015 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
PPARG-207ENST00000397015 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
PPARG-207ENST00000397015 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
PPARG-207ENST00000397015 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.93
PPARG-207ENST00000397015 SPRR2DP22532 72 aa2.93□□□□□ -1.94
PPARG-207ENST00000397015 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PPARG-207ENST00000397015 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
PPARG-207ENST00000397015 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
PPARG-207ENST00000397015 MT3P25713 68 aa2.86□□□□□ -1.95
PPARG-207ENST00000397015 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
PPARG-207ENST00000397015 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
PPARG-207ENST00000397015 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PPARG-207ENST00000397015 MT1AP04731 61 aa2.73□□□□□ -1.97
PPARG-207ENST00000397015 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
PPARG-207ENST00000397015 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
PPARG-207ENST00000397015 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
PPARG-207ENST00000397015 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
PPARG-207ENST00000397015 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
PPARG-207ENST00000397015 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
PPARG-207ENST00000397015 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
PPARG-207ENST00000397015 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
PPARG-207ENST00000397015 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
PPARG-207ENST00000397015 INE1O15225 51 aa2.56□□□□□ -2
PPARG-207ENST00000397015 MT4P47944 62 aa2.52□□□□□ -2.01
PPARG-207ENST00000397015 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
PPARG-207ENST00000397015 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
PPARG-207ENST00000397015 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
PPARG-207ENST00000397015 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PPARG-207ENST00000397015 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PPARG-207ENST00000397015 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
PPARG-207ENST00000397015 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
PPARG-207ENST00000397015 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
PPARG-207ENST00000397015 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
PPARG-207ENST00000397015 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
PPARG-207ENST00000397015 PRM1P04553 51 aa2.03□□□□□ -2.09
PPARG-207ENST00000397015 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
PPARG-207ENST00000397015 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
PPARG-207ENST00000397015 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
PPARG-207ENST00000397015 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
PPARG-207ENST00000397015 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
PPARG-207ENST00000397015 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PPARG-207ENST00000397015 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 86.9 ms