RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
EXOSC3-202ENST00000396521 MT4P47944 62 aa6.35□□□□□ -1.39
EXOSC3-202ENST00000396521 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
EXOSC3-202ENST00000396521 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
EXOSC3-202ENST00000396521 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
EXOSC3-202ENST00000396521 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
EXOSC3-202ENST00000396521 MT1MQ8N339 61 aa6.24□□□□□ -1.41
EXOSC3-202ENST00000396521 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
EXOSC3-202ENST00000396521 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
EXOSC3-202ENST00000396521 A6NED7 52 aa6.22□□□□□ -1.41
EXOSC3-202ENST00000396521 K7ERS5 55 aa6.17□□□□□ -1.42
EXOSC3-202ENST00000396521 MT1LQ93083 61 aa6.17□□□□□ -1.42
EXOSC3-202ENST00000396521 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
EXOSC3-202ENST00000396521 KRTAP5-7Q6L8G8 165 aa6.1□□□□□ -1.43
EXOSC3-202ENST00000396521 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
EXOSC3-202ENST00000396521 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
EXOSC3-202ENST00000396521 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
EXOSC3-202ENST00000396521 TNP1P09430 55 aa6□□□□□ -1.45
EXOSC3-202ENST00000396521 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
EXOSC3-202ENST00000396521 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
EXOSC3-202ENST00000396521 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
EXOSC3-202ENST00000396521 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
EXOSC3-202ENST00000396521 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
EXOSC3-202ENST00000396521 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
EXOSC3-202ENST00000396521 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
EXOSC3-202ENST00000396521 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-202ENST00000396521 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
EXOSC3-202ENST00000396521 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
EXOSC3-202ENST00000396521 ROMO1P60602 79 aa5.76□□□□□ -1.49
EXOSC3-202ENST00000396521 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
EXOSC3-202ENST00000396521 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
EXOSC3-202ENST00000396521 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
EXOSC3-202ENST00000396521 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-202ENST00000396521 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
EXOSC3-202ENST00000396521 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
EXOSC3-202ENST00000396521 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
EXOSC3-202ENST00000396521 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
EXOSC3-202ENST00000396521 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
EXOSC3-202ENST00000396521 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
EXOSC3-202ENST00000396521 AHNAKQ09666 5890 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-202ENST00000396521 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
EXOSC3-202ENST00000396521 MT1AP04731 61 aa5.27□□□□□ -1.57
EXOSC3-202ENST00000396521 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
EXOSC3-202ENST00000396521 MUC5BQ9HC84 5762 aaPredicted RBP5.24□□□□□ -1.57
EXOSC3-202ENST00000396521 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
EXOSC3-202ENST00000396521 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
EXOSC3-202ENST00000396521 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
EXOSC3-202ENST00000396521 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
EXOSC3-202ENST00000396521 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
EXOSC3-202ENST00000396521 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
EXOSC3-202ENST00000396521 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
EXOSC3-202ENST00000396521 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
EXOSC3-202ENST00000396521 H3BS24 57 aa4.97□□□□□ -1.61
EXOSC3-202ENST00000396521 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
EXOSC3-202ENST00000396521 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
EXOSC3-202ENST00000396521 MT3P25713 68 aa4.88□□□□□ -1.63
EXOSC3-202ENST00000396521 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
EXOSC3-202ENST00000396521 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
EXOSC3-202ENST00000396521 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
EXOSC3-202ENST00000396521 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
EXOSC3-202ENST00000396521 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
EXOSC3-202ENST00000396521 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
EXOSC3-202ENST00000396521 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
EXOSC3-202ENST00000396521 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
EXOSC3-202ENST00000396521 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
EXOSC3-202ENST00000396521 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
EXOSC3-202ENST00000396521 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
EXOSC3-202ENST00000396521 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
EXOSC3-202ENST00000396521 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
EXOSC3-202ENST00000396521 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
EXOSC3-202ENST00000396521 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
EXOSC3-202ENST00000396521 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
EXOSC3-202ENST00000396521 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
EXOSC3-202ENST00000396521 INE1O15225 51 aa3.12□□□□□ -1.91
EXOSC3-202ENST00000396521 PRM1P04553 51 aa2.97□□□□□ -1.93
EXOSC3-202ENST00000396521 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
EXOSC3-202ENST00000396521 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 5 ms