RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2EP22531 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2BP35325 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2AP35326 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
NDE1-202ENST00000396355 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
NDE1-202ENST00000396355 SPRR2DP22532 72 aa3□□□□□ -1.93
NDE1-202ENST00000396355 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
NDE1-202ENST00000396355 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
NDE1-202ENST00000396355 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
NDE1-202ENST00000396355 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
NDE1-202ENST00000396355 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
NDE1-202ENST00000396355 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
NDE1-202ENST00000396355 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
NDE1-202ENST00000396355 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
NDE1-202ENST00000396355 PRM1P04553 51 aa2.77□□□□□ -1.97
NDE1-202ENST00000396355 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
NDE1-202ENST00000396355 MT1GP13640 62 aa2.74□□□□□ -1.97
NDE1-202ENST00000396355 MT1EP04732 61 aa2.72□□□□□ -1.97
NDE1-202ENST00000396355 MT1LQ93083 61 aa2.71□□□□□ -1.98
NDE1-202ENST00000396355 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
NDE1-202ENST00000396355 MT4P47944 62 aa2.69□□□□□ -1.98
NDE1-202ENST00000396355 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
NDE1-202ENST00000396355 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
NDE1-202ENST00000396355 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
NDE1-202ENST00000396355 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
NDE1-202ENST00000396355 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
NDE1-202ENST00000396355 KRTAP19-4Q3LI73 84 aa2.57□□□□□ -2
NDE1-202ENST00000396355 LCE1DQ5T752 114 aa2.56□□□□□ -2
NDE1-202ENST00000396355 MT1MQ8N339 61 aa2.53□□□□□ -2
NDE1-202ENST00000396355 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
NDE1-202ENST00000396355 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
NDE1-202ENST00000396355 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
NDE1-202ENST00000396355 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
NDE1-202ENST00000396355 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NDE1-202ENST00000396355 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
NDE1-202ENST00000396355 MT1AP04731 61 aa2.24□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
NDE1-202ENST00000396355 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
NDE1-202ENST00000396355 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
NDE1-202ENST00000396355 MT3P25713 68 aa2.14□□□□□ -2.07
NDE1-202ENST00000396355 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
NDE1-202ENST00000396355 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
NDE1-202ENST00000396355 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
NDE1-202ENST00000396355 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
NDE1-202ENST00000396355 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
NDE1-202ENST00000396355 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
NDE1-202ENST00000396355 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
NDE1-202ENST00000396355 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
NDE1-202ENST00000396355 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
NDE1-202ENST00000396355 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
NDE1-202ENST00000396355 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
NDE1-202ENST00000396355 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NDE1-202ENST00000396355 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
NDE1-202ENST00000396355 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
NDE1-202ENST00000396355 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
NDE1-202ENST00000396355 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 102.1 ms