RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
CDRT1-204ENST00000395906 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CDRT1-204ENST00000395906 NEBP20929 6669 aa3.41□□□□□ -1.86
CDRT1-204ENST00000395906 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
CDRT1-204ENST00000395906 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
CDRT1-204ENST00000395906 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
CDRT1-204ENST00000395906 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
CDRT1-204ENST00000395906 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
CDRT1-204ENST00000395906 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
CDRT1-204ENST00000395906 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CDRT1-204ENST00000395906 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CDRT1-204ENST00000395906 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
CDRT1-204ENST00000395906 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CDRT1-204ENST00000395906 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CDRT1-204ENST00000395906 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
CDRT1-204ENST00000395906 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
CDRT1-204ENST00000395906 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
CDRT1-204ENST00000395906 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
CDRT1-204ENST00000395906 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
CDRT1-204ENST00000395906 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
CDRT1-204ENST00000395906 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
CDRT1-204ENST00000395906 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
CDRT1-204ENST00000395906 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
CDRT1-204ENST00000395906 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
CDRT1-204ENST00000395906 MT1EP04732 61 aa3.03□□□□□ -1.92
CDRT1-204ENST00000395906 PRM1P04553 51 aa2.98□□□□□ -1.93
CDRT1-204ENST00000395906 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
CDRT1-204ENST00000395906 MT1LQ93083 61 aa2.98□□□□□ -1.93
CDRT1-204ENST00000395906 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
CDRT1-204ENST00000395906 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
CDRT1-204ENST00000395906 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
CDRT1-204ENST00000395906 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
CDRT1-204ENST00000395906 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
CDRT1-204ENST00000395906 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
CDRT1-204ENST00000395906 SPRR2EP22531 72 aa2.88□□□□□ -1.95
CDRT1-204ENST00000395906 SPRR2BP35325 72 aa2.88□□□□□ -1.95
CDRT1-204ENST00000395906 SPRR2AP35326 72 aa2.88□□□□□ -1.95
CDRT1-204ENST00000395906 MT1AP04731 61 aa2.86□□□□□ -1.95
CDRT1-204ENST00000395906 MT1MQ8N339 61 aa2.86□□□□□ -1.95
CDRT1-204ENST00000395906 MT1GP13640 62 aa2.84□□□□□ -1.95
CDRT1-204ENST00000395906 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
CDRT1-204ENST00000395906 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.96
CDRT1-204ENST00000395906 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CDRT1-204ENST00000395906 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
CDRT1-204ENST00000395906 SPRR2DP22532 72 aa2.8□□□□□ -1.96
CDRT1-204ENST00000395906 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
CDRT1-204ENST00000395906 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
CDRT1-204ENST00000395906 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
CDRT1-204ENST00000395906 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
CDRT1-204ENST00000395906 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CDRT1-204ENST00000395906 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
CDRT1-204ENST00000395906 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
CDRT1-204ENST00000395906 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
CDRT1-204ENST00000395906 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CDRT1-204ENST00000395906 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
CDRT1-204ENST00000395906 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
CDRT1-204ENST00000395906 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
CDRT1-204ENST00000395906 MT4P47944 62 aa2.49□□□□□ -2.01
CDRT1-204ENST00000395906 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CDRT1-204ENST00000395906 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CDRT1-204ENST00000395906 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
CDRT1-204ENST00000395906 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
CDRT1-204ENST00000395906 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
CDRT1-204ENST00000395906 MT3P25713 68 aa2.24□□□□□ -2.05
CDRT1-204ENST00000395906 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
CDRT1-204ENST00000395906 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CDRT1-204ENST00000395906 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CDRT1-204ENST00000395906 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CDRT1-204ENST00000395906 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
CDRT1-204ENST00000395906 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
CDRT1-204ENST00000395906 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CDRT1-204ENST00000395906 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
CDRT1-204ENST00000395906 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CDRT1-204ENST00000395906 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
CDRT1-204ENST00000395906 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
CDRT1-204ENST00000395906 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CDRT1-204ENST00000395906 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 39.4 ms