RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
RTFDC1-203ENST00000395881 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
RTFDC1-203ENST00000395881 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
RTFDC1-203ENST00000395881 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
RTFDC1-203ENST00000395881 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.53
RTFDC1-203ENST00000395881 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
RTFDC1-203ENST00000395881 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
RTFDC1-203ENST00000395881 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
RTFDC1-203ENST00000395881 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
RTFDC1-203ENST00000395881 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
RTFDC1-203ENST00000395881 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
RTFDC1-203ENST00000395881 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
RTFDC1-203ENST00000395881 SPRR2EP22531 72 aa5.28□□□□□ -1.56
RTFDC1-203ENST00000395881 SPRR2BP35325 72 aa5.28□□□□□ -1.56
RTFDC1-203ENST00000395881 SPRR2AP35326 72 aa5.28□□□□□ -1.56
RTFDC1-203ENST00000395881 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
RTFDC1-203ENST00000395881 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
RTFDC1-203ENST00000395881 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
RTFDC1-203ENST00000395881 MT1EP04732 61 aa5.16□□□□□ -1.58
RTFDC1-203ENST00000395881 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
RTFDC1-203ENST00000395881 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
RTFDC1-203ENST00000395881 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
RTFDC1-203ENST00000395881 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
RTFDC1-203ENST00000395881 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
RTFDC1-203ENST00000395881 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
RTFDC1-203ENST00000395881 SPRR2DP22532 72 aa5.09□□□□□ -1.59
RTFDC1-203ENST00000395881 MT1LQ93083 61 aa5.09□□□□□ -1.59
RTFDC1-203ENST00000395881 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
RTFDC1-203ENST00000395881 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
RTFDC1-203ENST00000395881 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
RTFDC1-203ENST00000395881 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
RTFDC1-203ENST00000395881 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
RTFDC1-203ENST00000395881 MT1GP13640 62 aa4.92□□□□□ -1.62
RTFDC1-203ENST00000395881 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
RTFDC1-203ENST00000395881 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
RTFDC1-203ENST00000395881 MT1MQ8N339 61 aa4.84□□□□□ -1.63
RTFDC1-203ENST00000395881 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
RTFDC1-203ENST00000395881 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
RTFDC1-203ENST00000395881 INE1O15225 51 aa4.5□□□□□ -1.69
RTFDC1-203ENST00000395881 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
RTFDC1-203ENST00000395881 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
RTFDC1-203ENST00000395881 MT4P47944 62 aa4.46□□□□□ -1.7
RTFDC1-203ENST00000395881 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
RTFDC1-203ENST00000395881 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
RTFDC1-203ENST00000395881 MT1AP04731 61 aa4.35□□□□□ -1.71
RTFDC1-203ENST00000395881 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
RTFDC1-203ENST00000395881 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
RTFDC1-203ENST00000395881 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
RTFDC1-203ENST00000395881 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
RTFDC1-203ENST00000395881 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
RTFDC1-203ENST00000395881 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
RTFDC1-203ENST00000395881 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
RTFDC1-203ENST00000395881 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
RTFDC1-203ENST00000395881 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
RTFDC1-203ENST00000395881 MT3P25713 68 aa3.93□□□□□ -1.78
RTFDC1-203ENST00000395881 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
RTFDC1-203ENST00000395881 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
RTFDC1-203ENST00000395881 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
RTFDC1-203ENST00000395881 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
RTFDC1-203ENST00000395881 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
RTFDC1-203ENST00000395881 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
RTFDC1-203ENST00000395881 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
RTFDC1-203ENST00000395881 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
RTFDC1-203ENST00000395881 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
RTFDC1-203ENST00000395881 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
RTFDC1-203ENST00000395881 PRM1P04553 51 aa3.41□□□□□ -1.86
RTFDC1-203ENST00000395881 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
RTFDC1-203ENST00000395881 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
RTFDC1-203ENST00000395881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
RTFDC1-203ENST00000395881 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
RTFDC1-203ENST00000395881 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
RTFDC1-203ENST00000395881 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
RTFDC1-203ENST00000395881 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RTFDC1-203ENST00000395881 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
RTFDC1-203ENST00000395881 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RTFDC1-203ENST00000395881 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RTFDC1-203ENST00000395881 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms