RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MT1EP04732 61 aa5□□□□□ -1.61
VAPB-202ENST00000395802 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
VAPB-202ENST00000395802 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
VAPB-202ENST00000395802 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
VAPB-202ENST00000395802 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
VAPB-202ENST00000395802 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
VAPB-202ENST00000395802 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.62
VAPB-202ENST00000395802 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.62
VAPB-202ENST00000395802 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
VAPB-202ENST00000395802 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
VAPB-202ENST00000395802 MT1LQ93083 61 aa4.87□□□□□ -1.63
VAPB-202ENST00000395802 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
VAPB-202ENST00000395802 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
VAPB-202ENST00000395802 MT1GP13640 62 aa4.84□□□□□ -1.63
VAPB-202ENST00000395802 SPRR2EP22531 72 aa4.81□□□□□ -1.64
VAPB-202ENST00000395802 SPRR2BP35325 72 aa4.81□□□□□ -1.64
VAPB-202ENST00000395802 SPRR2AP35326 72 aa4.81□□□□□ -1.64
VAPB-202ENST00000395802 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
VAPB-202ENST00000395802 NEBP20929 6669 aa4.79□□□□□ -1.64
VAPB-202ENST00000395802 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
VAPB-202ENST00000395802 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
VAPB-202ENST00000395802 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
VAPB-202ENST00000395802 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
VAPB-202ENST00000395802 MT1MQ8N339 61 aa4.72□□□□□ -1.65
VAPB-202ENST00000395802 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
VAPB-202ENST00000395802 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
VAPB-202ENST00000395802 SPRR2DP22532 72 aa4.65□□□□□ -1.66
VAPB-202ENST00000395802 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
VAPB-202ENST00000395802 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
VAPB-202ENST00000395802 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
VAPB-202ENST00000395802 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
VAPB-202ENST00000395802 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
VAPB-202ENST00000395802 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
VAPB-202ENST00000395802 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
VAPB-202ENST00000395802 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
VAPB-202ENST00000395802 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
VAPB-202ENST00000395802 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
VAPB-202ENST00000395802 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
VAPB-202ENST00000395802 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
VAPB-202ENST00000395802 MT1AP04731 61 aa4.16□□□□□ -1.74
VAPB-202ENST00000395802 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
VAPB-202ENST00000395802 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
VAPB-202ENST00000395802 KRTAP12-4P60329 112 aa4.09□□□□□ -1.76
VAPB-202ENST00000395802 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
VAPB-202ENST00000395802 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
VAPB-202ENST00000395802 INE1O15225 51 aa4.07□□□□□ -1.76
VAPB-202ENST00000395802 MT4P47944 62 aa4.01□□□□□ -1.77
VAPB-202ENST00000395802 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
VAPB-202ENST00000395802 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
VAPB-202ENST00000395802 MT3P25713 68 aa3.82□□□□□ -1.8
VAPB-202ENST00000395802 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
VAPB-202ENST00000395802 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
VAPB-202ENST00000395802 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
VAPB-202ENST00000395802 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
VAPB-202ENST00000395802 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
VAPB-202ENST00000395802 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
VAPB-202ENST00000395802 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
VAPB-202ENST00000395802 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
VAPB-202ENST00000395802 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
VAPB-202ENST00000395802 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
VAPB-202ENST00000395802 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
VAPB-202ENST00000395802 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
VAPB-202ENST00000395802 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
VAPB-202ENST00000395802 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
VAPB-202ENST00000395802 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
VAPB-202ENST00000395802 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
VAPB-202ENST00000395802 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
VAPB-202ENST00000395802 PRM1P04553 51 aa3.03□□□□□ -1.93
VAPB-202ENST00000395802 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
VAPB-202ENST00000395802 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
VAPB-202ENST00000395802 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
VAPB-202ENST00000395802 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
VAPB-202ENST00000395802 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
VAPB-202ENST00000395802 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
VAPB-202ENST00000395802 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
VAPB-202ENST00000395802 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
VAPB-202ENST00000395802 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 82.1 ms