RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
COL11A2-204ENST00000395194 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
COL11A2-204ENST00000395194 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
COL11A2-204ENST00000395194 KRTAP5-4Q6L8H1 288 aa6.68□□□□□ -1.34
COL11A2-204ENST00000395194 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
COL11A2-204ENST00000395194 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
COL11A2-204ENST00000395194 A8MU10 97 aa6.66□□□□□ -1.34
COL11A2-204ENST00000395194 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
COL11A2-204ENST00000395194 TNP1P09430 55 aa6.6□□□□□ -1.35
COL11A2-204ENST00000395194 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
COL11A2-204ENST00000395194 UQCR11O14957 56 aa6.49□□□□□ -1.37
COL11A2-204ENST00000395194 V9GYY9 64 aa6.46□□□□□ -1.38
COL11A2-204ENST00000395194 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
COL11A2-204ENST00000395194 Q1T7F1 81 aa6.41□□□□□ -1.38
COL11A2-204ENST00000395194 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
COL11A2-204ENST00000395194 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
COL11A2-204ENST00000395194 PSPHP1O15172 72 aa6.37□□□□□ -1.39
COL11A2-204ENST00000395194 KRTAP20-2Q3LI61 65 aa6.37□□□□□ -1.39
COL11A2-204ENST00000395194 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
COL11A2-204ENST00000395194 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
COL11A2-204ENST00000395194 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
COL11A2-204ENST00000395194 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
COL11A2-204ENST00000395194 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
COL11A2-204ENST00000395194 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
COL11A2-204ENST00000395194 K7ERS5 55 aa6.22□□□□□ -1.41
COL11A2-204ENST00000395194 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
COL11A2-204ENST00000395194 A6NED7 52 aa6.19□□□□□ -1.42
COL11A2-204ENST00000395194 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
COL11A2-204ENST00000395194 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
COL11A2-204ENST00000395194 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
COL11A2-204ENST00000395194 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
COL11A2-204ENST00000395194 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
COL11A2-204ENST00000395194 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
COL11A2-204ENST00000395194 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
COL11A2-204ENST00000395194 ROMO1P60602 79 aa5.82□□□□□ -1.48
COL11A2-204ENST00000395194 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
COL11A2-204ENST00000395194 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
COL11A2-204ENST00000395194 MT1AP04731 61 aa5.79□□□□□ -1.48
COL11A2-204ENST00000395194 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
COL11A2-204ENST00000395194 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
COL11A2-204ENST00000395194 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
COL11A2-204ENST00000395194 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
COL11A2-204ENST00000395194 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
COL11A2-204ENST00000395194 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
COL11A2-204ENST00000395194 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
COL11A2-204ENST00000395194 AHNAKQ09666 5890 aaKnown RBP5.58□□□□□ -1.52
COL11A2-204ENST00000395194 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
COL11A2-204ENST00000395194 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
COL11A2-204ENST00000395194 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
COL11A2-204ENST00000395194 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
COL11A2-204ENST00000395194 MT3P25713 68 aa5.29□□□□□ -1.56
COL11A2-204ENST00000395194 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
COL11A2-204ENST00000395194 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
COL11A2-204ENST00000395194 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
COL11A2-204ENST00000395194 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
COL11A2-204ENST00000395194 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
COL11A2-204ENST00000395194 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
COL11A2-204ENST00000395194 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
COL11A2-204ENST00000395194 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
COL11A2-204ENST00000395194 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
COL11A2-204ENST00000395194 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
COL11A2-204ENST00000395194 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
COL11A2-204ENST00000395194 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
COL11A2-204ENST00000395194 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
COL11A2-204ENST00000395194 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
COL11A2-204ENST00000395194 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
COL11A2-204ENST00000395194 H3BS24 57 aa3.97□□□□□ -1.77
COL11A2-204ENST00000395194 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
COL11A2-204ENST00000395194 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
COL11A2-204ENST00000395194 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
COL11A2-204ENST00000395194 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
COL11A2-204ENST00000395194 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
COL11A2-204ENST00000395194 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
COL11A2-204ENST00000395194 INE1O15225 51 aa3.36□□□□□ -1.87
COL11A2-204ENST00000395194 PRM1P04553 51 aa2.99□□□□□ -1.93
COL11A2-204ENST00000395194 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
COL11A2-204ENST00000395194 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 63.3 ms