RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
SLC6A4-202ENST00000394821 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
SLC6A4-202ENST00000394821 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
SLC6A4-202ENST00000394821 MT1LQ93083 61 aa6.02□□□□□ -1.45
SLC6A4-202ENST00000394821 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
SLC6A4-202ENST00000394821 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
SLC6A4-202ENST00000394821 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
SLC6A4-202ENST00000394821 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
SLC6A4-202ENST00000394821 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
SLC6A4-202ENST00000394821 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
SLC6A4-202ENST00000394821 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
SLC6A4-202ENST00000394821 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SLC6A4-202ENST00000394821 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
SLC6A4-202ENST00000394821 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
SLC6A4-202ENST00000394821 MT1GP13640 62 aa5.8□□□□□ -1.48
SLC6A4-202ENST00000394821 MT1MQ8N339 61 aa5.8□□□□□ -1.48
SLC6A4-202ENST00000394821 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
SLC6A4-202ENST00000394821 SPRR2EP22531 72 aa5.77□□□□□ -1.49
SLC6A4-202ENST00000394821 SPRR2BP35325 72 aa5.77□□□□□ -1.49
SLC6A4-202ENST00000394821 SPRR2AP35326 72 aa5.77□□□□□ -1.49
SLC6A4-202ENST00000394821 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
SLC6A4-202ENST00000394821 INE1O15225 51 aa5.65□□□□□ -1.5
SLC6A4-202ENST00000394821 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
SLC6A4-202ENST00000394821 NEBP20929 6669 aa5.56□□□□□ -1.52
SLC6A4-202ENST00000394821 SPRR2DP22532 72 aa5.55□□□□□ -1.52
SLC6A4-202ENST00000394821 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
SLC6A4-202ENST00000394821 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
SLC6A4-202ENST00000394821 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
SLC6A4-202ENST00000394821 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
SLC6A4-202ENST00000394821 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SLC6A4-202ENST00000394821 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
SLC6A4-202ENST00000394821 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
SLC6A4-202ENST00000394821 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
SLC6A4-202ENST00000394821 MT1AP04731 61 aa5.06□□□□□ -1.6
SLC6A4-202ENST00000394821 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
SLC6A4-202ENST00000394821 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
SLC6A4-202ENST00000394821 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
SLC6A4-202ENST00000394821 MT4P47944 62 aa4.89□□□□□ -1.63
SLC6A4-202ENST00000394821 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
SLC6A4-202ENST00000394821 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
SLC6A4-202ENST00000394821 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SLC6A4-202ENST00000394821 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
SLC6A4-202ENST00000394821 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
SLC6A4-202ENST00000394821 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
SLC6A4-202ENST00000394821 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
SLC6A4-202ENST00000394821 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
SLC6A4-202ENST00000394821 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
SLC6A4-202ENST00000394821 MT3P25713 68 aa4.57□□□□□ -1.68
SLC6A4-202ENST00000394821 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SLC6A4-202ENST00000394821 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
SLC6A4-202ENST00000394821 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
SLC6A4-202ENST00000394821 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
SLC6A4-202ENST00000394821 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
SLC6A4-202ENST00000394821 PRM1P04553 51 aa4.1□□□□□ -1.75
SLC6A4-202ENST00000394821 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SLC6A4-202ENST00000394821 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
SLC6A4-202ENST00000394821 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
SLC6A4-202ENST00000394821 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
SLC6A4-202ENST00000394821 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SLC6A4-202ENST00000394821 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
SLC6A4-202ENST00000394821 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SLC6A4-202ENST00000394821 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
SLC6A4-202ENST00000394821 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
SLC6A4-202ENST00000394821 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
SLC6A4-202ENST00000394821 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
SLC6A4-202ENST00000394821 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SLC6A4-202ENST00000394821 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
SLC6A4-202ENST00000394821 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
SLC6A4-202ENST00000394821 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
SLC6A4-202ENST00000394821 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
SLC6A4-202ENST00000394821 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SLC6A4-202ENST00000394821 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
SLC6A4-202ENST00000394821 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SLC6A4-202ENST00000394821 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
SLC6A4-202ENST00000394821 PHGR1C9JFL3 82 aa2.84□□□□□ -1.96
SLC6A4-202ENST00000394821 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SLC6A4-202ENST00000394821 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SLC6A4-202ENST00000394821 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms