RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 MT1FP04733 61 aa3.11□□□□□ -1.91
RTN4-205ENST00000394609 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
RTN4-205ENST00000394609 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
RTN4-205ENST00000394609 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
RTN4-205ENST00000394609 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
RTN4-205ENST00000394609 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
RTN4-205ENST00000394609 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
RTN4-205ENST00000394609 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
RTN4-205ENST00000394609 MT1BP07438 61 aa2.94□□□□□ -1.94
RTN4-205ENST00000394609 TNP1P09430 55 aa2.9□□□□□ -1.95
RTN4-205ENST00000394609 USH2AO75445 5202 aa2.89□□□□□ -1.95
RTN4-205ENST00000394609 MT1XP80297 61 aa2.86□□□□□ -1.95
RTN4-205ENST00000394609 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
RTN4-205ENST00000394609 INE1O15225 51 aa2.82□□□□□ -1.96
RTN4-205ENST00000394609 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
RTN4-205ENST00000394609 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
RTN4-205ENST00000394609 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
RTN4-205ENST00000394609 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
RTN4-205ENST00000394609 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
RTN4-205ENST00000394609 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
RTN4-205ENST00000394609 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
RTN4-205ENST00000394609 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
RTN4-205ENST00000394609 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
RTN4-205ENST00000394609 KMT2DO14686 5537 aa2.68□□□□□ -1.98
RTN4-205ENST00000394609 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
RTN4-205ENST00000394609 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
RTN4-205ENST00000394609 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
RTN4-205ENST00000394609 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
RTN4-205ENST00000394609 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
RTN4-205ENST00000394609 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
RTN4-205ENST00000394609 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
RTN4-205ENST00000394609 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
RTN4-205ENST00000394609 MT1EP04732 61 aa2.49□□□□□ -2.01
RTN4-205ENST00000394609 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
RTN4-205ENST00000394609 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.01
RTN4-205ENST00000394609 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
RTN4-205ENST00000394609 MT1LQ93083 61 aa2.45□□□□□ -2.02
RTN4-205ENST00000394609 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
RTN4-205ENST00000394609 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
RTN4-205ENST00000394609 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
RTN4-205ENST00000394609 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
RTN4-205ENST00000394609 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
RTN4-205ENST00000394609 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
RTN4-205ENST00000394609 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
RTN4-205ENST00000394609 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
RTN4-205ENST00000394609 MT1GP13640 62 aa2.35□□□□□ -2.03
RTN4-205ENST00000394609 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
RTN4-205ENST00000394609 MT1MQ8N339 61 aa2.35□□□□□ -2.03
RTN4-205ENST00000394609 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
RTN4-205ENST00000394609 SPRR2EP22531 72 aa2.31□□□□□ -2.04
RTN4-205ENST00000394609 SPRR2BP35325 72 aa2.31□□□□□ -2.04
RTN4-205ENST00000394609 SPRR2AP35326 72 aa2.31□□□□□ -2.04
RTN4-205ENST00000394609 DSTQ03001 7570 aaKnown RBP2.3□□□□□ -2.04
RTN4-205ENST00000394609 SPRR2DP22532 72 aa2.21□□□□□ -2.06
RTN4-205ENST00000394609 NEBP20929 6669 aa2.17□□□□□ -2.06
RTN4-205ENST00000394609 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
RTN4-205ENST00000394609 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
RTN4-205ENST00000394609 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
RTN4-205ENST00000394609 MT1AP04731 61 aa2.06□□□□□ -2.08
RTN4-205ENST00000394609 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
RTN4-205ENST00000394609 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
RTN4-205ENST00000394609 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
RTN4-205ENST00000394609 MT4P47944 62 aa1.96□□□□□ -2.1
RTN4-205ENST00000394609 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
RTN4-205ENST00000394609 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
RTN4-205ENST00000394609 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
RTN4-205ENST00000394609 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
RTN4-205ENST00000394609 PRM1P04553 51 aa1.84□□□□□ -2.12
RTN4-205ENST00000394609 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
RTN4-205ENST00000394609 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
RTN4-205ENST00000394609 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
RTN4-205ENST00000394609 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
RTN4-205ENST00000394609 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
RTN4-205ENST00000394609 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
RTN4-205ENST00000394609 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
RTN4-205ENST00000394609 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
RTN4-205ENST00000394609 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms