RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
CCT4-201ENST00000394440 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
CCT4-201ENST00000394440 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
CCT4-201ENST00000394440 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
CCT4-201ENST00000394440 KRTAP5-9P26371 169 aa5.41□□□□□ -1.54
CCT4-201ENST00000394440 MT1EP04732 61 aa5.4□□□□□ -1.54
CCT4-201ENST00000394440 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
CCT4-201ENST00000394440 MT1LQ93083 61 aa5.32□□□□□ -1.56
CCT4-201ENST00000394440 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
CCT4-201ENST00000394440 MDN1Q9NU22 5596 aa5.31□□□□□ -1.56
CCT4-201ENST00000394440 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
CCT4-201ENST00000394440 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
CCT4-201ENST00000394440 SPRR2EP22531 72 aa5.21□□□□□ -1.58
CCT4-201ENST00000394440 SPRR2BP35325 72 aa5.21□□□□□ -1.58
CCT4-201ENST00000394440 SPRR2AP35326 72 aa5.21□□□□□ -1.58
CCT4-201ENST00000394440 INE1O15225 51 aa5.18□□□□□ -1.58
CCT4-201ENST00000394440 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
CCT4-201ENST00000394440 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
CCT4-201ENST00000394440 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
CCT4-201ENST00000394440 KRTAP19-3Q7Z4W3 81 aa5.16□□□□□ -1.58
CCT4-201ENST00000394440 MT1GP13640 62 aa5.11□□□□□ -1.59
CCT4-201ENST00000394440 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
CCT4-201ENST00000394440 MT1MQ8N339 61 aa5.08□□□□□ -1.6
CCT4-201ENST00000394440 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
CCT4-201ENST00000394440 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
CCT4-201ENST00000394440 SPRR2DP22532 72 aa5.03□□□□□ -1.6
CCT4-201ENST00000394440 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
CCT4-201ENST00000394440 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
CCT4-201ENST00000394440 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
CCT4-201ENST00000394440 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
CCT4-201ENST00000394440 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CCT4-201ENST00000394440 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CCT4-201ENST00000394440 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
CCT4-201ENST00000394440 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
CCT4-201ENST00000394440 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
CCT4-201ENST00000394440 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
CCT4-201ENST00000394440 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
CCT4-201ENST00000394440 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
CCT4-201ENST00000394440 MT1AP04731 61 aa4.51□□□□□ -1.69
CCT4-201ENST00000394440 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
CCT4-201ENST00000394440 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
CCT4-201ENST00000394440 MT4P47944 62 aa4.41□□□□□ -1.7
CCT4-201ENST00000394440 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
CCT4-201ENST00000394440 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
CCT4-201ENST00000394440 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
CCT4-201ENST00000394440 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
CCT4-201ENST00000394440 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
CCT4-201ENST00000394440 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
CCT4-201ENST00000394440 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
CCT4-201ENST00000394440 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
CCT4-201ENST00000394440 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
CCT4-201ENST00000394440 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
CCT4-201ENST00000394440 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
CCT4-201ENST00000394440 MT3P25713 68 aa4.05□□□□□ -1.76
CCT4-201ENST00000394440 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
CCT4-201ENST00000394440 LCE1EQ5T753 118 aa4□□□□□ -1.77
CCT4-201ENST00000394440 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
CCT4-201ENST00000394440 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CCT4-201ENST00000394440 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
CCT4-201ENST00000394440 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CCT4-201ENST00000394440 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
CCT4-201ENST00000394440 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CCT4-201ENST00000394440 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
CCT4-201ENST00000394440 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
CCT4-201ENST00000394440 PRM1P04553 51 aa3.47□□□□□ -1.85
CCT4-201ENST00000394440 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
CCT4-201ENST00000394440 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
CCT4-201ENST00000394440 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CCT4-201ENST00000394440 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CCT4-201ENST00000394440 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CCT4-201ENST00000394440 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
CCT4-201ENST00000394440 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
CCT4-201ENST00000394440 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
CCT4-201ENST00000394440 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CCT4-201ENST00000394440 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
CCT4-201ENST00000394440 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
CCT4-201ENST00000394440 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms