RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
THRA-202ENST00000394121 MUC12Q9UKN1 5478 aa8.07□□□□□ -1.12
THRA-202ENST00000394121 KRTAP4-7Q9BYR0 210 aa8.05□□□□□ -1.12
THRA-202ENST00000394121 MT1LQ93083 61 aa8.01□□□□□ -1.13
THRA-202ENST00000394121 MT1EP04732 61 aa8□□□□□ -1.13
THRA-202ENST00000394121 KRTAP2-3P0C7H8 128 aa7.99□□□□□ -1.13
THRA-202ENST00000394121 KRTAP2-4Q9BYR9 128 aa7.99□□□□□ -1.13
THRA-202ENST00000394121 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
THRA-202ENST00000394121 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
THRA-202ENST00000394121 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
THRA-202ENST00000394121 MDN1Q9NU22 5596 aa7.84□□□□□ -1.15
THRA-202ENST00000394121 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
THRA-202ENST00000394121 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
THRA-202ENST00000394121 KRTAP19-3Q7Z4W3 81 aa7.65□□□□□ -1.18
THRA-202ENST00000394121 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
THRA-202ENST00000394121 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
THRA-202ENST00000394121 LCE5AQ5TCM9 118 aa7.54□□□□□ -1.2
THRA-202ENST00000394121 SPRR2EP22531 72 aa7.53□□□□□ -1.2
THRA-202ENST00000394121 SPRR2BP35325 72 aa7.53□□□□□ -1.2
THRA-202ENST00000394121 SPRR2AP35326 72 aa7.53□□□□□ -1.2
THRA-202ENST00000394121 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
THRA-202ENST00000394121 MT1GP13640 62 aa7.52□□□□□ -1.21
THRA-202ENST00000394121 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
THRA-202ENST00000394121 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
THRA-202ENST00000394121 MT1MQ8N339 61 aa7.51□□□□□ -1.21
THRA-202ENST00000394121 NEBP20929 6669 aa7.32□□□□□ -1.24
THRA-202ENST00000394121 SPRR2DP22532 72 aa7.24□□□□□ -1.25
THRA-202ENST00000394121 KRTAP12-4P60329 112 aa7.06□□□□□ -1.28
THRA-202ENST00000394121 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
THRA-202ENST00000394121 MT1AP04731 61 aa6.81□□□□□ -1.32
THRA-202ENST00000394121 KRTAP6-1Q3LI64 71 aa6.79□□□□□ -1.32
THRA-202ENST00000394121 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
THRA-202ENST00000394121 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
THRA-202ENST00000394121 KRTAP20-1Q3LI63 56 aa6.66□□□□□ -1.34
THRA-202ENST00000394121 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
THRA-202ENST00000394121 LCE3DQ9BYE3 92 aa6.59□□□□□ -1.36
THRA-202ENST00000394121 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.36
THRA-202ENST00000394121 LCE3EQ5T5B0 92 aa6.52□□□□□ -1.37
THRA-202ENST00000394121 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
THRA-202ENST00000394121 MT4P47944 62 aa6.39□□□□□ -1.39
THRA-202ENST00000394121 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
THRA-202ENST00000394121 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
THRA-202ENST00000394121 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
THRA-202ENST00000394121 HMCN1Q96RW7 5635 aa6.26□□□□□ -1.41
THRA-202ENST00000394121 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
THRA-202ENST00000394121 PRM1P04553 51 aa6.24□□□□□ -1.41
THRA-202ENST00000394121 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
THRA-202ENST00000394121 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
THRA-202ENST00000394121 MT3P25713 68 aa6.05□□□□□ -1.44
THRA-202ENST00000394121 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
THRA-202ENST00000394121 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
THRA-202ENST00000394121 KRTAP5-2Q701N4 177 aa5.85□□□□□ -1.47
THRA-202ENST00000394121 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
THRA-202ENST00000394121 LCE1EQ5T753 118 aa5.34□□□□□ -1.56
THRA-202ENST00000394121 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
THRA-202ENST00000394121 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
THRA-202ENST00000394121 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
THRA-202ENST00000394121 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
THRA-202ENST00000394121 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
THRA-202ENST00000394121 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
THRA-202ENST00000394121 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
THRA-202ENST00000394121 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.62
THRA-202ENST00000394121 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.64
THRA-202ENST00000394121 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
THRA-202ENST00000394121 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
THRA-202ENST00000394121 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
THRA-202ENST00000394121 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
THRA-202ENST00000394121 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
THRA-202ENST00000394121 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
THRA-202ENST00000394121 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
THRA-202ENST00000394121 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
THRA-202ENST00000394121 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
THRA-202ENST00000394121 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
THRA-202ENST00000394121 KRTAP21-1Q3LI58 79 aa3.97□□□□□ -1.77
THRA-202ENST00000394121 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
THRA-202ENST00000394121 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
THRA-202ENST00000394121 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms