RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
CTTN-204ENST00000393747 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
CTTN-204ENST00000393747 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
CTTN-204ENST00000393747 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
CTTN-204ENST00000393747 MT4P47944 62 aa6.29□□□□□ -1.4
CTTN-204ENST00000393747 V9GYY9 64 aa6.25□□□□□ -1.41
CTTN-204ENST00000393747 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
CTTN-204ENST00000393747 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
CTTN-204ENST00000393747 TNP1P09430 55 aa6.23□□□□□ -1.41
CTTN-204ENST00000393747 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
CTTN-204ENST00000393747 LINC01558Q9Y6Z2 57 aa6.17□□□□□ -1.42
CTTN-204ENST00000393747 Q1T7F1 81 aa6.16□□□□□ -1.42
CTTN-204ENST00000393747 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
CTTN-204ENST00000393747 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
CTTN-204ENST00000393747 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
CTTN-204ENST00000393747 PSPHP1O15172 72 aa6.05□□□□□ -1.44
CTTN-204ENST00000393747 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
CTTN-204ENST00000393747 KRTAP5-10Q6L8G5 202 aa6.05□□□□□ -1.44
CTTN-204ENST00000393747 UQCR11O14957 56 aa5.99□□□□□ -1.45
CTTN-204ENST00000393747 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
CTTN-204ENST00000393747 A6NED7 52 aa5.94□□□□□ -1.46
CTTN-204ENST00000393747 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
CTTN-204ENST00000393747 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
CTTN-204ENST00000393747 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
CTTN-204ENST00000393747 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
CTTN-204ENST00000393747 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
CTTN-204ENST00000393747 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
CTTN-204ENST00000393747 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
CTTN-204ENST00000393747 K7ERS5 55 aa5.79□□□□□ -1.48
CTTN-204ENST00000393747 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
CTTN-204ENST00000393747 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
CTTN-204ENST00000393747 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
CTTN-204ENST00000393747 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
CTTN-204ENST00000393747 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
CTTN-204ENST00000393747 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CTTN-204ENST00000393747 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
CTTN-204ENST00000393747 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
CTTN-204ENST00000393747 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CTTN-204ENST00000393747 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
CTTN-204ENST00000393747 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
CTTN-204ENST00000393747 MT1AP04731 61 aa5.44□□□□□ -1.54
CTTN-204ENST00000393747 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
CTTN-204ENST00000393747 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.55
CTTN-204ENST00000393747 ROMO1P60602 79 aa5.39□□□□□ -1.55
CTTN-204ENST00000393747 H3BS24 57 aa5.37□□□□□ -1.55
CTTN-204ENST00000393747 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
CTTN-204ENST00000393747 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
CTTN-204ENST00000393747 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
CTTN-204ENST00000393747 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CTTN-204ENST00000393747 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
CTTN-204ENST00000393747 MUC5BQ9HC84 5762 aaPredicted RBP5.14□□□□□ -1.59
CTTN-204ENST00000393747 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
CTTN-204ENST00000393747 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
CTTN-204ENST00000393747 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
CTTN-204ENST00000393747 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
CTTN-204ENST00000393747 MT3P25713 68 aa4.95□□□□□ -1.62
CTTN-204ENST00000393747 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
CTTN-204ENST00000393747 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
CTTN-204ENST00000393747 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CTTN-204ENST00000393747 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
CTTN-204ENST00000393747 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
CTTN-204ENST00000393747 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
CTTN-204ENST00000393747 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
CTTN-204ENST00000393747 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
CTTN-204ENST00000393747 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
CTTN-204ENST00000393747 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
CTTN-204ENST00000393747 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
CTTN-204ENST00000393747 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
CTTN-204ENST00000393747 INE1O15225 51 aa3.8□□□□□ -1.8
CTTN-204ENST00000393747 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CTTN-204ENST00000393747 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CTTN-204ENST00000393747 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
CTTN-204ENST00000393747 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
CTTN-204ENST00000393747 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
CTTN-204ENST00000393747 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
CTTN-204ENST00000393747 PRM1P04553 51 aa2.77□□□□□ -1.97
CTTN-204ENST00000393747 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CTTN-204ENST00000393747 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms