RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 SMG1Q96Q15 3661 aaKnown RBP1.09□□□□□ -2.24
PHF3-202ENST00000393387 CMYA5Q8N3K9 4069 aa1.09□□□□□ -2.24
PHF3-202ENST00000393387 ADGRG4Q8IZF6 3080 aa1.08□□□□□ -2.24
PHF3-202ENST00000393387 DNAH10Q8IVF4 4471 aa1.08□□□□□ -2.24
PHF3-202ENST00000393387 TRRAPQ9Y4A5 3859 aa1.08□□□□□ -2.24
PHF3-202ENST00000393387 SPRR5A0A1B0GTR4 108 aa1.08□□□□□ -2.24
PHF3-202ENST00000393387 VPS13DQ5THJ4 4388 aa1.07□□□□□ -2.24
PHF3-202ENST00000393387 HRNRQ86YZ3 2850 aaPredicted RBP1.07□□□□□ -2.24
PHF3-202ENST00000393387 DMDP11532 3685 aa1.07□□□□□ -2.24
PHF3-202ENST00000393387 SPRR2DP22532 72 aa1.07□□□□□ -2.24
PHF3-202ENST00000393387 TACC2O95359 2948 aa1.06□□□□□ -2.24
PHF3-202ENST00000393387 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
PHF3-202ENST00000393387 BOD1L1Q8NFC6 3051 aa1.06□□□□□ -2.24
PHF3-202ENST00000393387 FRAS1Q86XX4 4008 aa1.06□□□□□ -2.24
PHF3-202ENST00000393387 FLNCQ14315 2725 aa1.06□□□□□ -2.24
PHF3-202ENST00000393387 KRTAP2-2Q9BYT5 123 aa1.05□□□□□ -2.24
PHF3-202ENST00000393387 SVEP1Q4LDE5 3571 aa1.05□□□□□ -2.24
PHF3-202ENST00000393387 ZANQ9Y493 2812 aa1.05□□□□□ -2.24
PHF3-202ENST00000393387 KRTAP5-2Q701N4 177 aa1.04□□□□□ -2.24
PHF3-202ENST00000393387 PKHD1P08F94 4074 aa1.04□□□□□ -2.24
PHF3-202ENST00000393387 VPS13CQ709C8 3753 aa1.04□□□□□ -2.24
PHF3-202ENST00000393387 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
PHF3-202ENST00000393387 LRP1Q07954 4544 aaKnown RBP1.03□□□□□ -2.24
PHF3-202ENST00000393387 APOBP04114 4563 aaKnown RBP1.03□□□□□ -2.25
PHF3-202ENST00000393387 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.02□□□□□ -2.25
PHF3-202ENST00000393387 MT1LQ93083 61 aa1.02□□□□□ -2.25
PHF3-202ENST00000393387 MT4P47944 62 aa1.01□□□□□ -2.25
PHF3-202ENST00000393387 MT1XP80297 61 aa1.01□□□□□ -2.25
PHF3-202ENST00000393387 PKD1P98161 4303 aa1.01□□□□□ -2.25
PHF3-202ENST00000393387 MT1EP04732 61 aa1□□□□□ -2.25
PHF3-202ENST00000393387 LCE1FQ5T754 118 aa1□□□□□ -2.25
PHF3-202ENST00000393387 PRKDCP78527 4128 aaKnown RBP1□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP4-3Q9BYR4 195 aa0.99□□□□□ -2.25
PHF3-202ENST00000393387 TNXBP22105 4242 aa0.99□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
PHF3-202ENST00000393387 FLGP20930 4061 aaPredicted RBP0.97□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
PHF3-202ENST00000393387 PKD1L1Q8TDX9 2849 aa0.97□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.25
PHF3-202ENST00000393387 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
PHF3-202ENST00000393387 MT1BP07438 61 aa0.95□□□□□ -2.26
PHF3-202ENST00000393387 MT1MQ8N339 61 aa0.95□□□□□ -2.26
PHF3-202ENST00000393387 KRTAP20-1Q3LI63 56 aa0.95□□□□□ -2.26
PHF3-202ENST00000393387 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
PHF3-202ENST00000393387 LCE1EQ5T753 118 aa0.94□□□□□ -2.26
PHF3-202ENST00000393387 MT1AP04731 61 aa0.94□□□□□ -2.26
PHF3-202ENST00000393387 LPAP08519 4548 aa0.93□□□□□ -2.26
PHF3-202ENST00000393387 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
PHF3-202ENST00000393387 KRTAP2-1Q9BYU5 128 aa0.91□□□□□ -2.26
PHF3-202ENST00000393387 SYNE2Q8WXH0 6885 aaKnown RBP0.89□□□□□ -2.27
PHF3-202ENST00000393387 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
PHF3-202ENST00000393387 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
PHF3-202ENST00000393387 KRTAP5-5Q701N2 237 aaPredicted RBP0.87□□□□□ -2.27
PHF3-202ENST00000393387 KRTAP19-2Q3LHN2 52 aa0.85□□□□□ -2.27
PHF3-202ENST00000393387 KRTAP9-6A8MVA2 160 aa0.85□□□□□ -2.27
PHF3-202ENST00000393387 OBSCNQ5VST9 7968 aa0.84□□□□□ -2.27
PHF3-202ENST00000393387 KRTAP5-9P26371 169 aa0.84□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
PHF3-202ENST00000393387 MACF1Q9UPN3 7388 aaKnown RBP0.82□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP5-1Q6L8H4 278 aa0.81□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP4-4Q9BYR3 166 aa0.79□□□□□ -2.28
PHF3-202ENST00000393387 KRTAP5-4Q6L8H1 288 aa0.78□□□□□ -2.28
PHF3-202ENST00000393387 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
PHF3-202ENST00000393387 KRTAP5-8O75690 187 aa0.74□□□□□ -2.29
PHF3-202ENST00000393387 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
PHF3-202ENST00000393387 FSIP2Q5CZC0 6907 aa0.72□□□□□ -2.29
PHF3-202ENST00000393387 MUC19Q7Z5P9 8384 aa0.67□□□□□ -2.3
PHF3-202ENST00000393387 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
PHF3-202ENST00000393387 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
PHF3-202ENST00000393387 KRTAP21-2Q3LI59 83 aa0.49□□□□□ -2.33
PHF3-202ENST00000393387 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 70.7 ms