RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 MUC12Q9UKN1 5478 aa8.21□□□□□ -1.09
PICALM-202ENST00000393346 MT1EP04732 61 aa8.21□□□□□ -1.1
PICALM-202ENST00000393346 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
PICALM-202ENST00000393346 MT1LQ93083 61 aa8.11□□□□□ -1.11
PICALM-202ENST00000393346 KRTAP2-3P0C7H8 128 aa8.07□□□□□ -1.12
PICALM-202ENST00000393346 KRTAP2-4Q9BYR9 128 aa8.07□□□□□ -1.12
PICALM-202ENST00000393346 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
PICALM-202ENST00000393346 SPRR2FQ96RM1 72 aa8.07□□□□□ -1.12
PICALM-202ENST00000393346 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
PICALM-202ENST00000393346 KRTAP19-3Q7Z4W3 81 aa7.89□□□□□ -1.15
PICALM-202ENST00000393346 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
PICALM-202ENST00000393346 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
PICALM-202ENST00000393346 KRTAP5-9P26371 169 aa7.85□□□□□ -1.15
PICALM-202ENST00000393346 MT1GP13640 62 aa7.8□□□□□ -1.16
PICALM-202ENST00000393346 DSTQ03001 7570 aaKnown RBP7.75□□□□□ -1.17
PICALM-202ENST00000393346 LCE5AQ5TCM9 118 aa7.73□□□□□ -1.17
PICALM-202ENST00000393346 MT1MQ8N339 61 aa7.73□□□□□ -1.17
PICALM-202ENST00000393346 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
PICALM-202ENST00000393346 LCE1AQ5T7P2 110 aa7.65□□□□□ -1.18
PICALM-202ENST00000393346 KRTAP6-3Q3LI67 103 aa7.64□□□□□ -1.19
PICALM-202ENST00000393346 SPRR2EP22531 72 aa7.6□□□□□ -1.19
PICALM-202ENST00000393346 SPRR2BP35325 72 aa7.6□□□□□ -1.19
PICALM-202ENST00000393346 SPRR2AP35326 72 aa7.6□□□□□ -1.19
PICALM-202ENST00000393346 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
PICALM-202ENST00000393346 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
PICALM-202ENST00000393346 SPRR2DP22532 72 aa7.3□□□□□ -1.24
PICALM-202ENST00000393346 NEBP20929 6669 aa7.18□□□□□ -1.26
PICALM-202ENST00000393346 KRTAP12-4P60329 112 aa7.12□□□□□ -1.27
PICALM-202ENST00000393346 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
PICALM-202ENST00000393346 KRTAP5-5Q701N2 237 aaPredicted RBP6.94□□□□□ -1.3
PICALM-202ENST00000393346 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.3
PICALM-202ENST00000393346 MT1AP04731 61 aa6.88□□□□□ -1.31
PICALM-202ENST00000393346 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
PICALM-202ENST00000393346 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
PICALM-202ENST00000393346 LCE3DQ9BYE3 92 aa6.65□□□□□ -1.34
PICALM-202ENST00000393346 LCE3EQ5T5B0 92 aa6.58□□□□□ -1.36
PICALM-202ENST00000393346 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
PICALM-202ENST00000393346 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
PICALM-202ENST00000393346 KRTAP20-1Q3LI63 56 aa6.54□□□□□ -1.36
PICALM-202ENST00000393346 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
PICALM-202ENST00000393346 MT4P47944 62 aa6.41□□□□□ -1.38
PICALM-202ENST00000393346 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
PICALM-202ENST00000393346 OBSCNQ5VST9 7968 aa6.37□□□□□ -1.39
PICALM-202ENST00000393346 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
PICALM-202ENST00000393346 PRM1P04553 51 aa6.29□□□□□ -1.4
PICALM-202ENST00000393346 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
PICALM-202ENST00000393346 HMCN1Q96RW7 5635 aa6.26□□□□□ -1.41
PICALM-202ENST00000393346 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
PICALM-202ENST00000393346 MT3P25713 68 aa6.19□□□□□ -1.42
PICALM-202ENST00000393346 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
PICALM-202ENST00000393346 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.46
PICALM-202ENST00000393346 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
PICALM-202ENST00000393346 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
PICALM-202ENST00000393346 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
PICALM-202ENST00000393346 LCE1EQ5T753 118 aa5.31□□□□□ -1.56
PICALM-202ENST00000393346 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
PICALM-202ENST00000393346 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
PICALM-202ENST00000393346 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
PICALM-202ENST00000393346 LCE1BQ5T7P3 118 aa5.11□□□□□ -1.59
PICALM-202ENST00000393346 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
PICALM-202ENST00000393346 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
PICALM-202ENST00000393346 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
PICALM-202ENST00000393346 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
PICALM-202ENST00000393346 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
PICALM-202ENST00000393346 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
PICALM-202ENST00000393346 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
PICALM-202ENST00000393346 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
PICALM-202ENST00000393346 KRTAP21-2Q3LI59 83 aa4.45□□□□□ -1.7
PICALM-202ENST00000393346 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
PICALM-202ENST00000393346 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
PICALM-202ENST00000393346 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
PICALM-202ENST00000393346 KRTAP21-1Q3LI58 79 aa4□□□□□ -1.77
PICALM-202ENST00000393346 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
PICALM-202ENST00000393346 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
PICALM-202ENST00000393346 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
PICALM-202ENST00000393346 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
PICALM-202ENST00000393346 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms