RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 KRTAP9-9Q9BYP9 154 aa6.29□□□□□ -1.4
MBD4-202ENST00000393278 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
MBD4-202ENST00000393278 NEBP20929 6669 aa6.26□□□□□ -1.41
MBD4-202ENST00000393278 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
MBD4-202ENST00000393278 MT1LQ93083 61 aa6.23□□□□□ -1.41
MBD4-202ENST00000393278 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
MBD4-202ENST00000393278 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
MBD4-202ENST00000393278 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
MBD4-202ENST00000393278 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
MBD4-202ENST00000393278 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
MBD4-202ENST00000393278 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
MBD4-202ENST00000393278 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
MBD4-202ENST00000393278 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
MBD4-202ENST00000393278 MT1GP13640 62 aa6.03□□□□□ -1.44
MBD4-202ENST00000393278 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
MBD4-202ENST00000393278 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
MBD4-202ENST00000393278 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
MBD4-202ENST00000393278 MT1MQ8N339 61 aa5.98□□□□□ -1.45
MBD4-202ENST00000393278 KRTAP20-1Q3LI63 56 aa5.97□□□□□ -1.45
MBD4-202ENST00000393278 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
MBD4-202ENST00000393278 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
MBD4-202ENST00000393278 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
MBD4-202ENST00000393278 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
MBD4-202ENST00000393278 SPRR2EP22531 72 aa5.86□□□□□ -1.47
MBD4-202ENST00000393278 SPRR2BP35325 72 aa5.86□□□□□ -1.47
MBD4-202ENST00000393278 SPRR2AP35326 72 aa5.86□□□□□ -1.47
MBD4-202ENST00000393278 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
MBD4-202ENST00000393278 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
MBD4-202ENST00000393278 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
MBD4-202ENST00000393278 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
MBD4-202ENST00000393278 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
MBD4-202ENST00000393278 SPRR2DP22532 72 aa5.64□□□□□ -1.51
MBD4-202ENST00000393278 DSTQ03001 7570 aaKnown RBP5.61□□□□□ -1.51
MBD4-202ENST00000393278 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
MBD4-202ENST00000393278 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
MBD4-202ENST00000393278 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
MBD4-202ENST00000393278 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
MBD4-202ENST00000393278 MT1AP04731 61 aa5.29□□□□□ -1.56
MBD4-202ENST00000393278 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
MBD4-202ENST00000393278 H3BS24 57 aa5.21□□□□□ -1.58
MBD4-202ENST00000393278 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
MBD4-202ENST00000393278 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.59
MBD4-202ENST00000393278 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
MBD4-202ENST00000393278 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
MBD4-202ENST00000393278 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
MBD4-202ENST00000393278 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
MBD4-202ENST00000393278 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
MBD4-202ENST00000393278 MT4P47944 62 aa4.96□□□□□ -1.62
MBD4-202ENST00000393278 INE1O15225 51 aa4.86□□□□□ -1.63
MBD4-202ENST00000393278 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
MBD4-202ENST00000393278 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
MBD4-202ENST00000393278 MT3P25713 68 aa4.79□□□□□ -1.64
MBD4-202ENST00000393278 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
MBD4-202ENST00000393278 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
MBD4-202ENST00000393278 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
MBD4-202ENST00000393278 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
MBD4-202ENST00000393278 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
MBD4-202ENST00000393278 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
MBD4-202ENST00000393278 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
MBD4-202ENST00000393278 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
MBD4-202ENST00000393278 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
MBD4-202ENST00000393278 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
MBD4-202ENST00000393278 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
MBD4-202ENST00000393278 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
MBD4-202ENST00000393278 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
MBD4-202ENST00000393278 MUC5ACP98088 5654 aa4□□□□□ -1.77
MBD4-202ENST00000393278 PRM1P04553 51 aa3.95□□□□□ -1.78
MBD4-202ENST00000393278 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
MBD4-202ENST00000393278 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
MBD4-202ENST00000393278 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.81
MBD4-202ENST00000393278 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
MBD4-202ENST00000393278 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
MBD4-202ENST00000393278 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
MBD4-202ENST00000393278 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
MBD4-202ENST00000393278 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
MBD4-202ENST00000393278 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
MBD4-202ENST00000393278 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms