RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MT1LQ93083 61 aa5.29□□□□□ -1.56
MKS1-202ENST00000393119 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
MKS1-202ENST00000393119 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
MKS1-202ENST00000393119 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
MKS1-202ENST00000393119 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
MKS1-202ENST00000393119 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
MKS1-202ENST00000393119 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
MKS1-202ENST00000393119 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
MKS1-202ENST00000393119 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
MKS1-202ENST00000393119 MT1MQ8N339 61 aa5.06□□□□□ -1.6
MKS1-202ENST00000393119 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
MKS1-202ENST00000393119 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
MKS1-202ENST00000393119 MT1GP13640 62 aa5.02□□□□□ -1.61
MKS1-202ENST00000393119 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
MKS1-202ENST00000393119 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
MKS1-202ENST00000393119 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
MKS1-202ENST00000393119 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
MKS1-202ENST00000393119 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
MKS1-202ENST00000393119 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
MKS1-202ENST00000393119 SPRR2EP22531 72 aa4.91□□□□□ -1.62
MKS1-202ENST00000393119 SPRR2BP35325 72 aa4.91□□□□□ -1.62
MKS1-202ENST00000393119 SPRR2AP35326 72 aa4.91□□□□□ -1.62
MKS1-202ENST00000393119 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
MKS1-202ENST00000393119 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
MKS1-202ENST00000393119 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
MKS1-202ENST00000393119 SPRR2DP22532 72 aa4.7□□□□□ -1.66
MKS1-202ENST00000393119 NEBP20929 6669 aa4.7□□□□□ -1.66
MKS1-202ENST00000393119 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
MKS1-202ENST00000393119 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
MKS1-202ENST00000393119 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
MKS1-202ENST00000393119 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
MKS1-202ENST00000393119 MT1AP04731 61 aa4.42□□□□□ -1.7
MKS1-202ENST00000393119 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
MKS1-202ENST00000393119 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
MKS1-202ENST00000393119 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
MKS1-202ENST00000393119 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
MKS1-202ENST00000393119 MT4P47944 62 aa4.21□□□□□ -1.74
MKS1-202ENST00000393119 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
MKS1-202ENST00000393119 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
MKS1-202ENST00000393119 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
MKS1-202ENST00000393119 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
MKS1-202ENST00000393119 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
MKS1-202ENST00000393119 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
MKS1-202ENST00000393119 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
MKS1-202ENST00000393119 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
MKS1-202ENST00000393119 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
MKS1-202ENST00000393119 MT3P25713 68 aa3.98□□□□□ -1.77
MKS1-202ENST00000393119 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
MKS1-202ENST00000393119 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
MKS1-202ENST00000393119 PRM1P04553 51 aa3.89□□□□□ -1.79
MKS1-202ENST00000393119 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
MKS1-202ENST00000393119 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
MKS1-202ENST00000393119 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
MKS1-202ENST00000393119 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
MKS1-202ENST00000393119 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
MKS1-202ENST00000393119 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
MKS1-202ENST00000393119 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
MKS1-202ENST00000393119 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
MKS1-202ENST00000393119 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
MKS1-202ENST00000393119 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
MKS1-202ENST00000393119 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
MKS1-202ENST00000393119 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
MKS1-202ENST00000393119 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
MKS1-202ENST00000393119 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
MKS1-202ENST00000393119 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
MKS1-202ENST00000393119 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
MKS1-202ENST00000393119 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
MKS1-202ENST00000393119 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
MKS1-202ENST00000393119 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
MKS1-202ENST00000393119 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
MKS1-202ENST00000393119 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
MKS1-202ENST00000393119 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
MKS1-202ENST00000393119 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
MKS1-202ENST00000393119 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
MKS1-202ENST00000393119 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
MKS1-202ENST00000393119 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
MKS1-202ENST00000393119 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms