RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 M0QZ58 72 aa2.09□□□□□ -2.07
GTDC1-205ENST00000392871 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
GTDC1-205ENST00000392871 KRTAP4-3Q9BYR4 195 aa2.06□□□□□ -2.08
GTDC1-205ENST00000392871 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
GTDC1-205ENST00000392871 MT1HP80294 61 aa2.01□□□□□ -2.09
GTDC1-205ENST00000392871 KRTAP10-7P60409 375 aaPredicted RBP1.99□□□□□ -2.09
GTDC1-205ENST00000392871 M0R2T5 61 aa1.97□□□□□ -2.09
GTDC1-205ENST00000392871 KRTAP10-5P60370 271 aa1.96□□□□□ -2.09
GTDC1-205ENST00000392871 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
GTDC1-205ENST00000392871 MT2AP02795 61 aa1.92□□□□□ -2.1
GTDC1-205ENST00000392871 MT1FP04733 61 aa1.92□□□□□ -2.1
GTDC1-205ENST00000392871 KRTAP10-10P60014 251 aa1.9□□□□□ -2.11
GTDC1-205ENST00000392871 SPRR2GQ9BYE4 73 aa1.89□□□□□ -2.11
GTDC1-205ENST00000392871 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
GTDC1-205ENST00000392871 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
GTDC1-205ENST00000392871 USH2AO75445 5202 aa1.86□□□□□ -2.11
GTDC1-205ENST00000392871 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
GTDC1-205ENST00000392871 TNP1P09430 55 aa1.85□□□□□ -2.11
GTDC1-205ENST00000392871 SPRR5A0A1B0GTR4 108 aa1.84□□□□□ -2.11
GTDC1-205ENST00000392871 MT1BP07438 61 aa1.83□□□□□ -2.12
GTDC1-205ENST00000392871 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
GTDC1-205ENST00000392871 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
GTDC1-205ENST00000392871 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
GTDC1-205ENST00000392871 MT1XP80297 61 aa1.81□□□□□ -2.12
GTDC1-205ENST00000392871 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
GTDC1-205ENST00000392871 KMT2DO14686 5537 aa1.8□□□□□ -2.12
GTDC1-205ENST00000392871 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
GTDC1-205ENST00000392871 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
GTDC1-205ENST00000392871 FSIP2Q5CZC0 6907 aa1.76□□□□□ -2.13
GTDC1-205ENST00000392871 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
GTDC1-205ENST00000392871 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
GTDC1-205ENST00000392871 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
GTDC1-205ENST00000392871 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
GTDC1-205ENST00000392871 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
GTDC1-205ENST00000392871 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
GTDC1-205ENST00000392871 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
GTDC1-205ENST00000392871 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
GTDC1-205ENST00000392871 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
GTDC1-205ENST00000392871 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
GTDC1-205ENST00000392871 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
GTDC1-205ENST00000392871 MT1EP04732 61 aa1.56□□□□□ -2.16
GTDC1-205ENST00000392871 SYNE2Q8WXH0 6885 aaKnown RBP1.56□□□□□ -2.16
GTDC1-205ENST00000392871 MT1LQ93083 61 aa1.55□□□□□ -2.16
GTDC1-205ENST00000392871 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
GTDC1-205ENST00000392871 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
GTDC1-205ENST00000392871 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
GTDC1-205ENST00000392871 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
GTDC1-205ENST00000392871 INE1O15225 51 aa1.48□□□□□ -2.17
GTDC1-205ENST00000392871 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
GTDC1-205ENST00000392871 MT1GP13640 62 aa1.47□□□□□ -2.17
GTDC1-205ENST00000392871 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
GTDC1-205ENST00000392871 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
GTDC1-205ENST00000392871 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
GTDC1-205ENST00000392871 KRTAP2-1Q9BYU5 128 aa1.47□□□□□ -2.17
GTDC1-205ENST00000392871 MT1MQ8N339 61 aa1.46□□□□□ -2.18
GTDC1-205ENST00000392871 NEBP20929 6669 aa1.46□□□□□ -2.18
GTDC1-205ENST00000392871 SPRR2EP22531 72 aa1.43□□□□□ -2.18
GTDC1-205ENST00000392871 SPRR2BP35325 72 aa1.43□□□□□ -2.18
GTDC1-205ENST00000392871 SPRR2AP35326 72 aa1.43□□□□□ -2.18
GTDC1-205ENST00000392871 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
GTDC1-205ENST00000392871 SPRR2DP22532 72 aa1.37□□□□□ -2.19
GTDC1-205ENST00000392871 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
GTDC1-205ENST00000392871 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.2
GTDC1-205ENST00000392871 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
GTDC1-205ENST00000392871 MT1AP04731 61 aa1.29□□□□□ -2.2
GTDC1-205ENST00000392871 LCE1CQ5T751 118 aa1.23□□□□□ -2.21
GTDC1-205ENST00000392871 LCE1BQ5T7P3 118 aa1.23□□□□□ -2.21
GTDC1-205ENST00000392871 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
GTDC1-205ENST00000392871 MT4P47944 62 aa1.21□□□□□ -2.22
GTDC1-205ENST00000392871 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
GTDC1-205ENST00000392871 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
GTDC1-205ENST00000392871 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
GTDC1-205ENST00000392871 PRM1P04553 51 aa1.16□□□□□ -2.22
GTDC1-205ENST00000392871 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
GTDC1-205ENST00000392871 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
GTDC1-205ENST00000392871 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
GTDC1-205ENST00000392871 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
GTDC1-205ENST00000392871 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 62.8 ms